{"id":"W2107449113","doi":"10.1002/jez.b.21070","title":"Unusual gene order and organization of the sea urchin hox cluster","year":2005,"lang":"en","type":"article","venue":"Journal of Experimental Zoology Part B Molecular and Developmental Evolution","topic":"Developmental Biology and Gene Regulation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":171,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; Sunnybrook Health Science Centre","funders":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","keywords":"Hox gene; Deuterostome; Strongylocentrotus purpuratus; Biology; Gene cluster; Sea urchin; Gene; Genetics; Evolutionary biology; Genome; Vertebrate; Gene family; Gene expression; Cell biology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002002604,0.0001365519,0.0001561959,0.00005993929,0.0001199047,0.000008176359,0.00009313035,0.0001591781,0.00001508572],"category_scores_gemma":[0.00005659663,0.0001059059,0.00004312751,0.0001224102,0.0002234327,0.00001892321,0.0001733679,0.00008226543,0.000001920486],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005644203,"about_ca_system_score_gemma":0.0001262215,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003043667,"about_ca_topic_score_gemma":0.000005914512,"domain_scores_codex":[0.9990865,0.000116915,0.0003630572,0.0001724909,0.0001244897,0.0001365402],"domain_scores_gemma":[0.9995294,0.000008479884,0.0002156747,0.00007484161,0.0001120862,0.0000595017],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001045611,0.00008096799,0.1059245,0.000004441773,0.00008305942,0.000001340562,0.0001448964,0.00005691074,0.892496,0.0001164474,0.000307303,0.000679474],"study_design_scores_gemma":[0.0009119738,0.0001755366,0.1018702,0.00001316104,0.00001961937,0.0007180665,0.0001864774,0.00002362983,0.8951069,0.00004398464,0.0008100976,0.0001204024],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9946968,0.002361586,0.002235268,0.0002416174,0.0001904453,0.0001218855,0.000003939218,0.000002638323,0.0001458184],"genre_scores_gemma":[0.9947572,0.00007136039,0.004642468,0.0003121682,0.00007526514,0.000002656941,0.00003809032,0.0000114682,0.00008926992],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004054339,"threshold_uncertainty_score":0.4318719,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.004543747187691919,"score_gpt":0.2244305463260186,"score_spread":0.2198867991383266,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}