{"id":"W2107636262","doi":"10.1128/jcm.44.2.449-458.2006","title":"Use of the <i>espZ</i> Gene Encoded in the Locus of Enterocyte Effacement for Molecular Typing of Shiga Toxin-Producing <i>Escherichia coli</i>","year":2006,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":21,"is_retracted":false,"has_abstract":true,"ca_institutions":"Public Health Agency of Canada","funders":"","keywords":"Biology; Shiga toxin; Subtyping; Locus (genetics); Serotype; Intimin; Escherichia coli; Genotype; Virulence; Typing; Microbiology; Pathogenicity island; Genetics; Multilocus sequence typing; Allele; Gene; Virology; Enterobacteriaceae","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003465285,0.0002960056,0.000214881,0.0003926784,0.0001089037,0.0002820015,0.0002444024,0.0003107026,0.0004065927],"category_scores_gemma":[0.0005962251,0.0001676598,0.0002348045,0.0002707601,0.0002208834,0.0001559925,0.0003106209,0.0003935208,0.0003002303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001339322,"about_ca_system_score_gemma":0.00009879607,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005038184,"about_ca_topic_score_gemma":0.0007578972,"domain_scores_codex":[0.999474,0.0001266154,0.00005881456,0.0001378483,0.0001306524,0.00007203218],"domain_scores_gemma":[0.9995455,0.0001550864,0.0001234876,0.00005676064,0.0000545459,0.00006461568],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00007851642,0.00003603276,0.002461398,0.0000144471,0.000005354617,0.00001453709,0.00001522705,0.00002897631,0.9958478,0.00001936657,0.00000940064,0.001468992],"study_design_scores_gemma":[0.00001601968,0.0009212959,0.08224595,0.00001417567,0.0000440873,0.0007180988,0.00008280983,0.002303577,0.9122149,0.00005913029,0.001364454,0.00001551081],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9891347,0.000189475,0.009312645,0.00005293879,0.000009830617,0.00007612885,0.0004206348,0.00004355902,0.0007600781],"genre_scores_gemma":[0.9736013,0.0003076194,0.02333978,0.000081334,0.00001030764,0.00008244198,0.001930229,0.0000224642,0.0006245855],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005038184,"threshold_uncertainty_score":0.001832604,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04294721326937957,"score_gpt":0.338397405316869,"score_spread":0.2954501920474894,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}