{"id":"W2107656326","doi":"10.4049/jimmunol.179.2.837","title":"Transcriptional Analysis of Clonal Deletion In Vivo","year":2007,"lang":"en","type":"article","venue":"The Journal of Immunology","topic":"Nuclear Receptors and Signaling","field":"Neuroscience","cited_by":88,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research; National Institutes of Health; Fondation pour la Recherche Médicale","keywords":"Biology; Clonal deletion; Negative selection; T-cell receptor; Gene; Nerve growth factor IB; Transgene; Cell biology; Major histocompatibility complex; Genetics; Gene expression; CD8; Clonal selection; Transcription factor; T cell; Immune system; Immunology","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000236001,0.0002187913,0.0002003452,0.0003261956,0.0001496104,0.0002623836,0.0001650854,0.0001606158,0.001257109],"category_scores_gemma":[0.0002282112,0.0001187252,0.0001877973,0.0002057063,0.0002231541,0.0001199903,0.0002238832,0.0006019383,0.0004181078],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002755751,"about_ca_system_score_gemma":0.0001402994,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003058821,"about_ca_topic_score_gemma":0.0006539043,"domain_scores_codex":[0.9997345,0.00003256185,0.00001286331,0.00006870935,0.00009568944,0.00005566333],"domain_scores_gemma":[0.9997087,0.00008280748,0.0000680064,0.00003090621,0.00005760894,0.00005197753],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002605599,0.000008818366,0.000177794,0.000006324099,0.000001078183,0.000007601406,0.00001001085,0.00001981666,0.9991838,0.00004010287,0.000009995462,0.0005084509],"study_design_scores_gemma":[0.000006674708,0.0001839844,0.008085835,0.000005063073,0.00001093028,0.0001286799,0.00003996481,0.0008904871,0.9895756,0.00007548926,0.0009941134,0.000003125734],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9870789,0.0007179576,0.009591363,0.00006626914,0.00001874242,0.00003451082,0.0007489242,0.0001101059,0.001633265],"genre_scores_gemma":[0.9866199,0.0007455822,0.005701615,0.00008644108,0.00001547377,0.0001013034,0.002249728,0.00008659067,0.004393214],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001257109,"threshold_uncertainty_score":0.004205465,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02255850646390519,"score_gpt":0.2654599432631743,"score_spread":0.2429014367992691,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}