{"id":"W2107751484","doi":"10.1186/gm62","title":"Copy number variations and cancer","year":2009,"lang":"en","type":"article","venue":"Genome Medicine","topic":"Genomic variations and chromosomal abnormalities","field":"Biochemistry, Genetics and Molecular Biology","cited_by":403,"is_retracted":false,"has_abstract":true,"ca_institutions":"SickKids Foundation; Hospital for Sick Children; University of Toronto","funders":"","keywords":"Copy-number variation; Biology; Genetics; Structural variation; Human genome; Genome; Single-nucleotide polymorphism; Genome instability; Genome-wide association study; Germline; Computational biology; Genomics; SNP; Human genetics; Cancer; SNP array; Gene; DNA; Genotype; DNA damage","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004084514,0.000204091,0.0003138974,0.001380526,0.0002779639,0.0007898035,0.0004241301,0.00074673,0.004384455],"category_scores_gemma":[0.002937336,0.00008511,0.000214482,0.001996897,0.0005166149,0.0005167791,0.000493454,0.0005229234,0.000493284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005429946,"about_ca_system_score_gemma":0.0002945522,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001424179,"about_ca_topic_score_gemma":0.001093765,"domain_scores_codex":[0.9993679,0.0001487749,0.00003841133,0.0001620985,0.000218961,0.00006397491],"domain_scores_gemma":[0.9990153,0.0004714589,0.000282348,0.00005333464,0.00009507556,0.00008246258],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0008426604,0.0001282217,0.3902906,0.001107322,0.00072758,0.007014807,0.0006617758,0.002888558,0.03524667,0.04119131,0.01287724,0.5070232],"study_design_scores_gemma":[0.00004316497,0.0003295641,0.6928077,0.0003458967,0.0004833899,0.05282584,0.0004416435,0.003110223,0.01101158,0.07251942,0.1659959,0.00008573481],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"review","genre_scores_codex":[0.530132,0.382383,0.01401735,0.01129554,0.000469534,0.0001016982,0.00324006,0.000288587,0.05807223],"genre_scores_gemma":[0.9359463,0.0529763,0.003097167,0.0006391982,0.0003575483,0.00003200341,0.0009202636,0.00002313739,0.006008043],"genre_candidate":"review","genre_consensus":null,"teacher_disagreement_score":0.004384455,"threshold_uncertainty_score":0.01466745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008173411182433884,"score_gpt":0.257472171987332,"score_spread":0.2492987608048981,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}