{"id":"W2107788310","doi":"10.1186/2046-2530-2-7","title":"The SYSCILIA gold standard (SCGSv1) of known ciliary components and its applications within a systems biology consortium","year":2013,"lang":"en","type":"article","venue":"Cilia","topic":"Genetic and Kidney Cyst Diseases","field":"Biochemistry, Genetics and Molecular Biology","cited_by":177,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Diabetes and Digestive and Kidney Diseases; Westfälische Wilhelms-Universität Münster; Universitair Medisch Centrum Utrecht; University College Dublin; University College London; Centre National de la Recherche Scientifique; European Molecular Biology Laboratory; Radboud Universiteit; Eberhard Karls Universität Tübingen; Universität Heidelberg","keywords":"Biology; Ciliopathies; Cilium; Ciliopathy; Computational biology; Phenotype; Bioinformatics; Genetics; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.007167086,0.002060734,0.001858173,0.007033242,0.001769276,0.002665155,0.003905228,0.002665842,0.005411818],"category_scores_gemma":[0.01608948,0.0009636171,0.001921661,0.005771471,0.000807758,0.00168001,0.004182335,0.001717693,0.005326526],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.002192705,"about_ca_system_score_gemma":0.005532194,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01847639,"about_ca_topic_score_gemma":0.0208366,"domain_scores_codex":[0.9957542,0.0008492183,0.0004589364,0.0011367,0.001522982,0.0002780159],"domain_scores_gemma":[0.9895704,0.003031929,0.0009103711,0.003993826,0.001916373,0.0005771609],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"not_applicable","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.001622249,0.0004005571,0.07453456,0.006128301,0.00102226,0.000739695,0.0005058178,0.0359966,0.04452777,0.01373195,0.687929,0.1328613],"study_design_scores_gemma":[0.0007084484,0.0009856446,0.1089405,0.001386698,0.0006207221,0.001536648,0.0004458529,0.2034335,0.06257005,0.02941308,0.5895523,0.0004065021],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.07100753,0.002856839,0.06685708,0.0008411967,0.0003284282,0.000751343,0.7910645,0.05290179,0.01339129],"genre_scores_gemma":[0.03708583,0.0002505709,0.03658332,0.0001404916,0.0000175629,0.0005255491,0.9233386,0.00126751,0.0007906241],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.01847639,"threshold_uncertainty_score":0.03790361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00949165706150604,"score_gpt":0.2349421671611346,"score_spread":0.2254505100996285,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}