{"id":"W2108138142","doi":"10.1128/aem.68.11.5671-5684.2002","title":"Cloning and Characterization of a Gene Cluster Involved in Cyclopentanol Metabolism in <i>Comamonas</i> sp. Strain NCIMB 9872 and Biotransformations Effected by <i>Escherichia coli</i> -Expressed Cyclopentanone 1,2-Monooxygenase","year":2002,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Microbial Metabolic Engineering and Bioproduction","field":"Biochemistry, Genetics and Molecular Biology","cited_by":122,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada; University of New Brunswick; Biotechnology Research Institute","funders":"","keywords":"Monooxygenase; Biology; Gene cluster; Escherichia coli; Cyclopentanone; Dehydrogenase; Gene; Biochemistry; Alcohol dehydrogenase; Pseudomonas putida; Open reading frame; Microbiology; Enzyme; Cytochrome P450; Peptide sequence","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009433865,0.0005802507,0.0004634174,0.0005288714,0.0003362898,0.0004596519,0.0003041542,0.0004329066,0.000733179],"category_scores_gemma":[0.0003528738,0.0002269862,0.0004309905,0.0007682387,0.0002449919,0.0002553668,0.000258615,0.0004759611,0.0007750612],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006509617,"about_ca_system_score_gemma":0.0007626797,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.009909482,"about_ca_topic_score_gemma":0.005002206,"domain_scores_codex":[0.9998487,0.000008318268,0.0000107555,0.00004476694,0.00003886623,0.00004859058],"domain_scores_gemma":[0.9996692,0.00005169692,0.00008754947,0.00003089066,0.00007929828,0.0000814384],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000238302,0.00006538309,0.001654325,0.00007992629,0.000005015131,0.0001378505,0.0001526412,0.0000912786,0.9937375,0.00006434206,0.00008419,0.003689287],"study_design_scores_gemma":[0.0001300633,0.001085842,0.366431,0.0001359256,0.0002101505,0.003038233,0.001410704,0.003265367,0.604369,0.0003992131,0.01944863,0.00007585453],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939471,0.0005720247,0.001710742,0.0002002267,0.00002081797,0.00005289929,0.002715537,0.00007358965,0.0007070305],"genre_scores_gemma":[0.9726251,0.0007098995,0.006002189,0.0001206403,0.00004041876,0.0001487348,0.01647019,0.0000538314,0.003828872],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009909482,"threshold_uncertainty_score":0.01970363,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.002688470833750174,"score_gpt":0.154696967058851,"score_spread":0.1520084962251008,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}