{"id":"W2108389135","doi":"10.1128/jvi.79.18.11752-11765.2005","title":"Evidence that Insertion of <i>Tomato Ringspot Nepovirus</i> NTB-VPg Protein in Endoplasmic Reticulum Membranes Is Directed by Two Domains: a C-Terminal Transmembrane Helix and an N-Terminal Amphipathic Helix","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":35,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Endoplasmic reticulum; Transmembrane domain; Membrane; Glycosylation; Transmembrane protein; Biochemistry; Membrane protein; Green fluorescent protein; N-terminus; C-terminus; Fusion protein; Cell biology; Biophysics; Peptide sequence; Amino acid; Recombinant DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001847488,0.0003244024,0.0001262665,0.0001363397,0.0001810854,0.0002733563,0.0002362595,0.0004127885,0.001015252],"category_scores_gemma":[0.0002493737,0.0001708477,0.0002681454,0.0001130374,0.000292931,0.0003012214,0.0003005587,0.000603297,0.0007061627],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003360517,"about_ca_system_score_gemma":0.0001681999,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005297458,"about_ca_topic_score_gemma":0.0004190317,"domain_scores_codex":[0.9998389,0.00003437654,0.00001821693,0.00004039914,0.00004142914,0.00002649738],"domain_scores_gemma":[0.9997382,0.00007872293,0.00007429223,0.0000299095,0.00002828245,0.00005069422],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00001632646,0.000006363926,0.00007769391,0.00001616641,0.000001652875,0.00003746502,0.000006427009,0.000005764723,0.9996736,0.0000446554,0.00001002362,0.0001038974],"study_design_scores_gemma":[0.00001973203,0.0001266647,0.007463246,0.00001152185,0.00001639691,0.001339927,0.00003394174,0.0006317951,0.9873567,0.00006859075,0.002925718,0.000005844481],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9901877,0.0009572898,0.005551507,0.0002184522,0.00004257054,0.00002986116,0.0003297271,0.0000570826,0.002625838],"genre_scores_gemma":[0.9854801,0.001192959,0.008171509,0.0002379669,0.00002080133,0.00006377244,0.001962676,0.00006597133,0.002804205],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001015252,"threshold_uncertainty_score":0.003396332,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03310904452275147,"score_gpt":0.286249414901409,"score_spread":0.2531403703786576,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}