{"id":"W2108443765","doi":"10.1186/1471-2156-9-45","title":"High density linkage disequilibrium maps of chromosome 14 in Holstein and Angus cattle","year":2008,"lang":"en","type":"article","venue":"BMC Genetics","topic":"Genetic and phenotypic traits in livestock","field":"Biochemistry, Genetics and Molecular Biology","cited_by":25,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Linkage disequilibrium; Haplotype; Genetics; Biology; Single-nucleotide polymorphism; Bovine genome; Tag SNP; International HapMap Project; Genetic association; Population; Genome; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000609476,0.0001316166,0.0002720348,0.002339504,0.000416556,0.000476547,0.0003042751,0.0001882501,0.001349034],"category_scores_gemma":[0.0008743244,0.0001305991,0.0002081259,0.001232975,0.0002493426,0.0001101581,0.0003720539,0.0002261841,0.0001747593],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004579648,"about_ca_system_score_gemma":0.0002488182,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005764793,"about_ca_topic_score_gemma":0.006986439,"domain_scores_codex":[0.9995582,0.0001046976,0.00003145207,0.0001445634,0.00008969487,0.00007141788],"domain_scores_gemma":[0.9992965,0.0003002764,0.000179434,0.00002931251,0.0000867132,0.0001077472],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.002692434,0.0003009553,0.8129014,0.0001916403,0.0006519532,0.0006787223,0.001674191,0.001014397,0.118879,0.001106914,0.0003725853,0.05953568],"study_design_scores_gemma":[0.00004174324,0.000114899,0.9965233,0.00001018533,0.00006822665,0.0002678975,0.0000981036,0.0004932754,0.00120155,0.0002000458,0.0009738896,0.000006812344],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981105,0.0003071234,0.0005538385,0.00001205133,0.000001880307,0.00000862197,0.0002773462,0.00001071813,0.0007178524],"genre_scores_gemma":[0.996138,0.0001264389,0.001996602,0.00001978899,0.000006694182,0.00002192996,0.001188794,0.000007328564,0.0004943911],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005764793,"threshold_uncertainty_score":0.01146245,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01457587334442538,"score_gpt":0.2201974027484183,"score_spread":0.2056215294039929,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}