{"id":"W2108616134","doi":"10.1099/mic.0.28025-0","title":"The mating pair stabilization protein, TraN, of the F plasmid is an outer-membrane protein with two regions that are important for its function in conjugation","year":2005,"lang":"en","type":"article","venue":"Microbiology","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":72,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"Natural Sciences and Engineering Research Council of Canada; Alberta Heritage Foundation for Medical Research","keywords":"Plasmid; Mutagenesis; Biology; Cysteine; Bacterial conjugation; Site-directed mutagenesis; Mutant; Conserved sequence; Biochemistry; Chemistry; Peptide sequence; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002761226,0.0001323842,0.0001407755,0.00002150609,0.000129143,0.00001657365,0.0001721447,0.0001357332,0.000004842292],"category_scores_gemma":[0.00005697793,0.00007951247,0.00004919555,0.00007486068,0.0001470119,0.00001175058,0.00002728038,0.00007113271,6.672933e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002448132,"about_ca_system_score_gemma":0.00006398894,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008954277,"about_ca_topic_score_gemma":0.001731146,"domain_scores_codex":[0.9990333,0.0001340775,0.0003115112,0.0002795158,0.00003836423,0.0002032496],"domain_scores_gemma":[0.9991611,0.00001697856,0.0003625251,0.0003159384,0.0001256854,0.00001778439],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004313607,0.00004532887,0.008845832,0.00004674179,0.00002079549,1.563008e-7,0.0001015399,0.0000537711,0.9899297,0.0001721252,0.0001038651,0.0002488027],"study_design_scores_gemma":[0.0008595492,0.0003154875,0.003613336,0.00008675003,0.00001299533,0.00001206588,0.0002733369,0.0001869741,0.9866654,0.00004149255,0.007813611,0.0001189597],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9945176,0.0001149471,0.002563226,0.00114215,0.00005373453,0.001506764,0.00007434661,0.00001062878,0.00001661707],"genre_scores_gemma":[0.9984927,0.00001231837,0.000769561,0.0001470049,0.00006597579,0.00009745834,0.0001560594,0.00001915085,0.0002398034],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.007709746,"threshold_uncertainty_score":0.3242424,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01413677055446552,"score_gpt":0.2312298430306349,"score_spread":0.2170930724761694,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}