{"id":"W2108650715","doi":"10.1093/molbev/msq309","title":"Unexpected Repertoire of Metazoan Transcription Factors in the Unicellular Holozoan Capsaspora owczarzaki","year":2010,"lang":"en","type":"article","venue":"Molecular Biology and Evolution","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":198,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université de Montréal","funders":"","keywords":"Biology; Repertoire; Evolutionary biology; Lineage (genetic); Phylogenetic tree; Phylogenetics; Homeobox; Transcription factor; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002731747,0.0001248507,0.0001348897,0.0000677388,0.00009122941,0.000005853275,0.0001924036,0.0003102896,0.000007211991],"category_scores_gemma":[0.00006109377,0.00009665597,0.00007839144,0.0001342015,0.0002583002,0.000004929987,0.0000382114,0.0001948105,0.000001214374],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000005900137,"about_ca_system_score_gemma":0.00002972289,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002878655,"about_ca_topic_score_gemma":0.0003247249,"domain_scores_codex":[0.9991486,0.0001911239,0.0001610126,0.000268213,0.00006005505,0.0001710115],"domain_scores_gemma":[0.9995602,0.000009483049,0.00006938862,0.000283041,0.00004481976,0.0000330801],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005446225,0.00004984831,0.08210657,0.000007978864,0.00002676941,0.000003723866,0.000178103,0.000005382285,0.9130141,0.004382093,0.0000154951,0.0001554412],"study_design_scores_gemma":[0.0006824856,0.0003301886,0.3967822,0.000006656391,0.00005632422,0.00002938115,0.0004874864,0.00004316522,0.5970113,0.003025542,0.001323539,0.0002217735],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.995922,0.0009703264,0.002473348,0.0001393293,0.0001251104,0.000184173,0.0000255381,0.000006716982,0.0001534367],"genre_scores_gemma":[0.9993556,0.00003986544,0.0001867315,0.00007702386,0.0000284616,0.000007508369,0.0002773154,0.000006193545,0.00002131195],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3160028,"threshold_uncertainty_score":0.3941516,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006555230910835994,"score_gpt":0.2285949477777536,"score_spread":0.2220397168669176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}