{"id":"W2108681289","doi":"10.1186/gb-2008-9-2-r35","title":"Proteomic analysis of the secretome of Leishmania donovani","year":2008,"lang":"en","type":"article","venue":"Genome biology","topic":"Research on Leishmaniasis Studies","field":"Medicine","cited_by":300,"is_retracted":false,"has_abstract":true,"ca_institutions":"Vancouver Coastal Health; Canada's Michael Smith Genome Sciences Centre; Vancouver Coastal Health Research Institute; University of British Columbia","funders":"Canadian Institutes of Health Research; University of British Columbia; Michael Smith Health Research BC","keywords":"Biology; Leishmania donovani; Computational biology; Human genetics; Genome Biology; Leishmania; Proteomics; Evolutionary biology; Genetics; Genomics; Leishmaniasis; Visceral leishmaniasis; Gene; Parasite hosting; Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002499328,0.0001059502,0.0006496139,0.0003331121,0.00006914981,9.281907e-7,0.0002411404,0.00009002648,0.0002521688],"category_scores_gemma":[0.000206459,0.00006421432,0.0002712753,0.001060143,0.0006484409,0.00001586207,0.0001949045,0.000140707,0.00001396303],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005554459,"about_ca_system_score_gemma":0.0001285489,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002037576,"about_ca_topic_score_gemma":0.00003195861,"domain_scores_codex":[0.9988982,0.0001065852,0.0003611846,0.0002202461,0.0001622506,0.000251535],"domain_scores_gemma":[0.9989542,0.00005921168,0.0001810729,0.0005309245,0.0002255063,0.00004907522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00009200889,0.00006874016,0.546208,0.00004075495,0.001706155,0.000005112889,0.0003703809,0.000008867671,0.4509249,0.0002874657,0.00009091775,0.000196629],"study_design_scores_gemma":[0.0004219997,0.0003129084,0.9831924,0.000006498213,0.0003368946,0.00002133094,0.00004805757,0.0000273798,0.01333885,0.00005979574,0.002176022,0.00005785828],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9965053,0.0006660857,0.00005220337,0.0005654299,0.00004638881,0.0004434049,0.0000450265,0.00001288127,0.001663276],"genre_scores_gemma":[0.9984341,0.0004641356,0.0003173918,0.00007772754,0.00005177215,0.00002512098,0.00001955061,0.000009018478,0.000601169],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4375861,"threshold_uncertainty_score":0.2761072,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0398037052234995,"score_gpt":0.3025326027617418,"score_spread":0.2627288975382422,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}