{"id":"W2108799705","doi":"10.1128/jb.00673-09","title":"Different Minimal Signal Peptide Lengths Recognized by the Archaeal Prepilin-Like Peptidases FlaK and PibD","year":2009,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Amino Acid Enzymes and Metabolism","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"Queen's University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Archaea; Signal peptide; Genetics; Peptide sequence; Bacteria; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001869406,0.0003991258,0.0002442445,0.000192655,0.0001077242,0.0003732523,0.0002744824,0.0003911346,0.0003671418],"category_scores_gemma":[0.0002899916,0.0002096105,0.000255565,0.0001921047,0.0002465514,0.0003127577,0.0002847291,0.000564569,0.0001995262],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003827286,"about_ca_system_score_gemma":0.0002041301,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005626259,"about_ca_topic_score_gemma":0.0005656476,"domain_scores_codex":[0.9997893,0.00003128939,0.00002952796,0.00004012246,0.0000590493,0.00005072094],"domain_scores_gemma":[0.9997968,0.00003671892,0.00005092499,0.00001556044,0.00002483415,0.00007519195],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001702128,0.00001220571,0.0003118164,0.00001847441,0.000003238394,0.00001982992,0.00001281328,0.00003495415,0.9990689,0.00003023968,0.000005160326,0.0003121883],"study_design_scores_gemma":[0.00002107859,0.0002826529,0.0126225,0.00000600918,0.00001746364,0.0002725584,0.0000833366,0.001005684,0.9849353,0.0000706376,0.0006719893,0.0000107004],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979048,0.0003451188,0.001308246,0.00002071949,0.000004241032,0.000009219163,0.0001422014,0.00001696377,0.0002485551],"genre_scores_gemma":[0.9940212,0.0002512312,0.003767485,0.00004693193,0.000002877401,0.00003599412,0.001249419,0.00001537882,0.0006094392],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0005626259,"threshold_uncertainty_score":0.002776861,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008171151119889192,"score_gpt":0.2351456290048344,"score_spread":0.2269744778849452,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}