{"id":"W2108817086","doi":"10.1111/j.1462-5822.2010.01476.x","title":"Sorting nexin 3 (SNX3) is a component of a tubular endosomal network induced by Salmonella and involved in maturation of the Salmonella-containing vacuole","year":2010,"lang":"en","type":"article","venue":"Cellular Microbiology","topic":"Vibrio bacteria research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":75,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto; Hospital for Sick Children","funders":"Canadian Institutes of Health Research; Wellcome Trust","keywords":"Sorting nexin; Endosome; Biology; Vacuole; Cell biology; Salmonella enterica; Retromer; Endomembrane system; LAMP1; Vacuolar protein sorting; Intracellular; Salmonella; Microbiology; Bacteria; Golgi apparatus; Genetics; Endoplasmic reticulum","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003725432,0.0001811139,0.0003348488,0.00004412474,0.00007520748,0.000009756879,0.0002443346,0.0002744657,0.00001110617],"category_scores_gemma":[0.0001085214,0.0001471629,0.00008249239,0.0001189543,0.0002712836,0.000004407369,0.0004249355,0.000261072,9.804261e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001149398,"about_ca_system_score_gemma":0.00006186211,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001044833,"about_ca_topic_score_gemma":0.0001853728,"domain_scores_codex":[0.9986,0.0002041727,0.00043906,0.000346967,0.00005431399,0.0003555088],"domain_scores_gemma":[0.9992294,0.00004064558,0.0002667029,0.0003392016,0.0000831014,0.00004090003],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001921168,0.00004599502,0.01601752,0.00003680358,0.00006396729,0.000001597048,0.000235525,0.000005726958,0.9830195,0.00002854104,0.0002337251,0.0001190066],"study_design_scores_gemma":[0.0007656182,0.0001997368,0.006773381,0.00003091014,0.00001368775,0.00001010645,0.0001255969,0.00008216021,0.9905122,0.00004940171,0.00129961,0.0001375801],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976256,0.00155236,0.00004378329,0.0001858651,0.0001762514,0.0003335657,0.0000308892,0.00000448026,0.00004715582],"genre_scores_gemma":[0.9992648,0.00007681682,0.0002911458,0.00009343975,0.00008387313,0.0000140125,0.0001280079,0.00001898372,0.00002887973],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.009244138,"threshold_uncertainty_score":0.6001129,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008331415643340216,"score_gpt":0.2233158282225114,"score_spread":0.2149844125791712,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}