{"id":"W2108901361","doi":"10.1128/jb.01885-07","title":"Flagellin and Outer Surface Proteins from <i>Borrelia burgdorferi</i> Are Not Glycosylated","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":10,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada","funders":"Akademie Věd České Republiky; Jihočeská Univerzita v Českých Budějovicích","keywords":"Borrelia burgdorferi; Glycoprotein; Flagellin; Biology; Glycosylation; Microbiology; Bacterial outer membrane; Borrelia; Spirochaetaceae; Membrane protein; Membrane glycoproteins; Biochemistry; Antibody; Escherichia coli; Membrane; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001739873,0.0002455266,0.0006815647,0.0001096171,0.0001618555,0.00001379428,0.0002173481,0.0004006423,0.0006111019],"category_scores_gemma":[0.0001734973,0.0002001808,0.0001619598,0.00008826084,0.0003733765,0.0001646029,0.00008552035,0.0005606732,0.0001912565],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005064126,"about_ca_system_score_gemma":0.0001245087,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002189248,"about_ca_topic_score_gemma":0.00003800581,"domain_scores_codex":[0.9983414,0.000383358,0.0006367062,0.000258346,0.00004231707,0.0003378794],"domain_scores_gemma":[0.9985663,0.0002324764,0.0006711377,0.0002317073,0.0002231839,0.00007523782],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001054316,0.0001974716,0.08836139,0.000008832207,0.0004387824,0.0004318269,0.0002877419,0.00002256706,0.9057313,0.000008816481,0.003139207,0.0003177299],"study_design_scores_gemma":[0.004166141,0.001474772,0.8193926,0.0001012189,0.0001921786,0.006762386,0.00009647448,0.000006569377,0.1255928,0.000137307,0.04163012,0.0004474348],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9944925,0.003038786,0.0001883497,0.0004901082,0.001433044,0.0001589885,0.0001073318,0.00004165599,0.00004920588],"genre_scores_gemma":[0.9978773,0.0007733233,0.0002607103,0.0005651152,0.0001705631,0.000002939482,0.00003401872,0.00002599616,0.0002900441],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7801386,"threshold_uncertainty_score":0.8163135,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01322531823440777,"score_gpt":0.2161309458509734,"score_spread":0.2029056276165656,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}