{"id":"W2109085179","doi":"10.1101/gr.4374505","title":"Selective sweep mapping of genes with large phenotypic effects","year":2005,"lang":"en","type":"article","venue":"Genome Research","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":130,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Saskatchewan","funders":"National Human Genome Research Institute; National Institutes of Health; National Science Foundation","keywords":"Biology; Selective sweep; Microsatellite; Genetics; Loss of heterozygosity; Gene; Breed; Allele; Fixation (population genetics); Genetic marker; Quantitative trait locus; Candidate gene; Evolutionary biology; Haplotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006988132,0.0002560675,0.0003101282,0.0004724503,0.0002000343,0.0002171666,0.0002912059,0.0002729443,0.00110624],"category_scores_gemma":[0.001127691,0.0001480983,0.0003771869,0.0004668102,0.0003710243,0.0001356327,0.0004001552,0.0003147289,0.0001114034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002326141,"about_ca_system_score_gemma":0.0001597262,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007737701,"about_ca_topic_score_gemma":0.001682948,"domain_scores_codex":[0.9997615,0.00009609661,0.000009728811,0.00008059767,0.00003639719,0.00001569428],"domain_scores_gemma":[0.9992334,0.0005600397,0.0001202957,0.0000395776,0.00001595384,0.00003076929],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0007249799,0.0001466598,0.06921647,0.0002845022,0.0006959036,0.001261787,0.000397235,0.04119758,0.8058122,0.008806439,0.0004477859,0.07100844],"study_design_scores_gemma":[0.0007216565,0.001041592,0.4268909,0.0000564127,0.001036073,0.003324128,0.0002844222,0.3394452,0.1964562,0.01888515,0.0117082,0.0001501239],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9754852,0.0002492595,0.02277792,0.00005471531,0.00000702839,0.00001983531,0.0001907215,0.0001976393,0.001017778],"genre_scores_gemma":[0.9903098,0.0001252853,0.008971039,0.00003399608,0.00000596149,0.00002994056,0.0001959989,0.00003553139,0.0002925877],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00110624,"threshold_uncertainty_score":0.003700733,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02516966801015989,"score_gpt":0.3219946153172374,"score_spread":0.2968249473070775,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}