{"id":"W2109146943","doi":"10.1186/s13568-014-0037-8","title":"Genome features of Pseudomonas putida LS46, a novel polyhydroxyalkanoate producer and its comparison with other P. putida strains","year":2014,"lang":"en","type":"article","venue":"AMB Express","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba","funders":"Natural Sciences and Engineering Research Council of Canada; Ministère des relations internationales et de la Francophonie; Genome Canada","keywords":"Pseudomonas putida; Polyhydroxyalkanoates; Pseudomonas; Biology; Genome; Microbiology; Pseudomonadales; Pseudomonas aeruginosa; Bacteria; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00003657259,0.0002958665,0.0002528736,0.00052142,0.0002149949,0.0002585901,0.0001125516,0.0002141573,0.0007487822],"category_scores_gemma":[0.0001913313,0.00009528644,0.0002506977,0.0007931258,0.00009294373,0.0001944029,0.0001812993,0.0001652684,0.0003083816],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009971918,"about_ca_system_score_gemma":0.0001308083,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001805843,"about_ca_topic_score_gemma":0.001143264,"domain_scores_codex":[0.9999291,0.000005426778,0.000008716391,0.00002584501,0.00002028494,0.00001071707],"domain_scores_gemma":[0.9998806,0.00001954206,0.0000406496,0.00000956968,0.00002124704,0.00002843109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.000310796,0.00004448733,0.009599068,0.0001644648,0.00001425462,0.0005615035,0.0001329848,0.0002466163,0.9830042,0.00002440896,0.00007156378,0.005825517],"study_design_scores_gemma":[0.00002982184,0.0007575594,0.778686,0.00003810766,0.0001334356,0.009373984,0.0006647166,0.002178487,0.1998403,0.0001509505,0.008098532,0.00004801721],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.994307,0.0005859077,0.0006202079,0.00004860175,0.000007951462,0.0000130726,0.003668072,0.00004204984,0.0007071721],"genre_scores_gemma":[0.9817354,0.0008771901,0.003606171,0.00003149891,0.00001548645,0.00002521752,0.01228397,0.00002280469,0.001402311],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001805843,"threshold_uncertainty_score":0.003590643,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01010035745321628,"score_gpt":0.2341434341108684,"score_spread":0.2240430766576522,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}