{"id":"W2109187906","doi":"10.1128/jvi.01329-08","title":"Biogenesis of Cytoplasmic Membranous Vesicles for Plant Potyvirus Replication Occurs at Endoplasmic Reticulum Exit Sites in a COPI- and COPII-Dependent Manner","year":2008,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Plant Virus Research Studies","field":"Agricultural and Biological Sciences","cited_by":188,"is_retracted":false,"has_abstract":true,"ca_institutions":"Agriculture and Agri-Food Canada; Western University","funders":"Natural Sciences and Engineering Research Council of Canada; Agriculture and Agri-Food Canada; Universiteit Utrecht; Oxford Brookes University; Oregon State University; Samuel Roberts Noble Foundation","keywords":"COPI; COPII; Biology; Endoplasmic reticulum; Cell biology; Golgi apparatus; Vesicle; Secretion; Potyvirus; Vesicular transport protein; Secretory pathway; Virology; Biochemistry; Virus; Plant virus","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002363169,0.0002766818,0.0003740341,0.0001795836,0.0002827219,0.0006071294,0.0001979121,0.00036433,0.0009256971],"category_scores_gemma":[0.0001390472,0.0002222315,0.0006199027,0.0001154102,0.0002040968,0.0004916338,0.0005265624,0.0007538157,0.0006283284],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004042757,"about_ca_system_score_gemma":0.0001880664,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001950382,"about_ca_topic_score_gemma":0.0002201911,"domain_scores_codex":[0.9997858,0.00002861103,0.00002007459,0.00005747674,0.00006380853,0.00004431304],"domain_scores_gemma":[0.999902,0.00001099719,0.0000256326,0.00001823076,0.00001833538,0.00002478998],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002773781,0.000005515667,0.00008564626,0.00002590044,0.000002958277,0.0000442487,0.0000107796,0.00002245101,0.9993079,0.0001253349,0.00001170191,0.0003297887],"study_design_scores_gemma":[0.00001183337,0.00009112105,0.008367066,0.0000100324,0.00001494212,0.0007149572,0.00003808211,0.00136016,0.9855205,0.0001190808,0.003742979,0.00000918066],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9879132,0.001764873,0.008087841,0.0001035596,0.00004216373,0.00003758488,0.0002834823,0.0001179491,0.001649361],"genre_scores_gemma":[0.9917745,0.0008717424,0.004070123,0.00003656706,0.00001053439,0.00004006721,0.0006027052,0.00003493342,0.002558783],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0009256971,"threshold_uncertainty_score":0.003096759,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04778272635640089,"score_gpt":0.2587292676373394,"score_spread":0.2109465412809385,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}