{"id":"W2109325984","doi":"10.1099/mic.0.040824-0","title":"Phenotypic diversification in vivo: Pseudomonas aeruginosa gacS− strains generate small colony variants in vivo that are distinct from in vitro variants","year":2010,"lang":"en","type":"article","venue":"Microbiology","topic":"Bacterial biofilms and quorum sensing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"In vivo; Pseudomonas aeruginosa; Biology; Microbiology; Phenotype; In vitro; Biofilm; Gene; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0002531938,0.0002771128,0.0003610591,0.0001295254,0.00006154036,0.00003369416,0.0002750556,0.0006039877,0.0001501204],"category_scores_gemma":[0.00006806702,0.0002832282,0.00006243566,0.0001497077,0.0001388268,0.000009417972,0.0001771969,0.0003246115,0.00001550487],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004546191,"about_ca_system_score_gemma":0.00008225917,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001743195,"about_ca_topic_score_gemma":0.02782982,"domain_scores_codex":[0.9981467,0.0002103697,0.0003659386,0.0007213187,0.00003227689,0.0005234109],"domain_scores_gemma":[0.9992839,0.00002948466,0.0001818277,0.0003968566,0.00003864303,0.00006924869],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003268898,0.0001479365,0.03120517,0.000006098118,0.00001929152,0.00004740538,0.0001119288,0.000007670272,0.9675162,0.00001815231,0.0001618296,0.0004314352],"study_design_scores_gemma":[0.001553638,0.00005687643,0.1650208,0.00002032545,0.000009965504,0.00002537536,0.0000743409,0.00005140212,0.8299537,0.00002441111,0.0028931,0.0003159707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976211,0.00008510126,0.00004431031,0.0002179431,0.0007974389,0.000279427,0.0007478686,0.00001194555,0.0001949314],"genre_scores_gemma":[0.9972769,0.00004230638,0.001248738,0.0002734789,0.0002192489,0.00001159956,0.0007931903,0.00002456264,0.0001099533],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1375624,"threshold_uncertainty_score":0.999962,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01338074494016996,"score_gpt":0.209843275392965,"score_spread":0.196462530452795,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}