{"id":"W2109396846","doi":"10.1128/genomea.00729-14","title":"Draft Genome Sequence of Listeria monocytogenes Strain LI0521 (syn. HPB7171), Isolated in 1983 during an Outbreak in Massachusetts Caused by Contaminated Cheese","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Listeria monocytogenes in Food Safety","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Food Inspection Agency; Health Canada","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Listeria monocytogenes; Outbreak; Strain (injury); Biology; Whole genome sequencing; Microbiology; Genome; Contamination; Bacteria; Listeria; Virology; Genetics; Gene; Ecology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006408371,0.001461595,0.001479631,0.003297813,0.001217116,0.001076179,0.001052183,0.001635756,0.005135215],"category_scores_gemma":[0.002241394,0.0007846634,0.001374741,0.004622077,0.0003539677,0.0006421758,0.0007756907,0.001590337,0.004174179],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001546238,"about_ca_system_score_gemma":0.003120092,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.02598963,"about_ca_topic_score_gemma":0.02827538,"domain_scores_codex":[0.9996086,0.00004339234,0.00006077832,0.0001157833,0.0001167075,0.00005482293],"domain_scores_gemma":[0.9989221,0.000190487,0.0003144682,0.00009209014,0.000341765,0.0001391316],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.003783369,0.0003927292,0.01480681,0.005427755,0.000307516,0.003007007,0.001895978,0.001587445,0.9015192,0.0008743653,0.027812,0.03858583],"study_design_scores_gemma":[0.0008764598,0.002424786,0.4944998,0.00157608,0.003060571,0.003621431,0.001916977,0.006455171,0.1069756,0.001088672,0.3770702,0.0004342715],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.3289177,0.008099277,0.02069451,0.001757339,0.0006796373,0.0006321726,0.6299016,0.002707951,0.006609812],"genre_scores_gemma":[0.08575819,0.002488375,0.02353627,0.0002444208,0.0001429499,0.0003631389,0.883188,0.000361658,0.003916951],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.02598963,"threshold_uncertainty_score":0.05167669,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04212650035971049,"score_gpt":0.3013299333867624,"score_spread":0.259203433027052,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}