{"id":"W2109638827","doi":"10.1099/ijs.0.65634-0","title":"Burkholderia latens sp. nov., Burkholderia diffusa sp. nov., Burkholderia arboris sp. nov., Burkholderia seminalis sp. nov. and Burkholderia metallica sp. nov., novel species within the Burkholderia cepacia complex","year":2008,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Plant Pathogenic Bacteria Studies","field":"Agricultural and Biological Sciences","cited_by":230,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Vlaamse regering; Universiteit Gent; Cystic Fibrosis Trust; Cystic Fibrosis Foundation","keywords":"Biology; Burkholderia; 16S ribosomal RNA; Burkholderia cepacia complex; Microbiology; Multilocus sequence typing; Gene; Genotype; Bacteria; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","sts","insufficient_payload"],"consensus_categories":["metaepi_narrow"],"category_scores_codex":[0.002604261,0.002049162,0.003766729,0.0004982775,0.001762632,0.0006636082,0.002920865,0.001077536,0.001396352],"category_scores_gemma":[0.0008503883,0.001103922,0.001092094,0.001052911,0.002486421,0.001184142,0.001443383,0.001431915,0.0001684836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006013314,"about_ca_system_score_gemma":0.0003139176,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007500303,"about_ca_topic_score_gemma":0.0005575616,"domain_scores_codex":[0.9887257,0.001042639,0.004905864,0.001982154,0.001471369,0.001872295],"domain_scores_gemma":[0.9905553,0.001656458,0.004223146,0.0007964674,0.002000688,0.000767971],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007170521,0.0008097439,0.00392571,0.0008458167,0.002287589,0.0005159526,0.00180613,0.00005965129,0.9765244,0.001183454,0.01126159,0.00006296478],"study_design_scores_gemma":[0.01924242,0.003638685,0.6120723,0.01524482,0.004767375,0.1749885,0.02090629,0.001812396,0.03830207,0.002009628,0.09675656,0.01025899],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9754987,0.006729398,0.0002742737,0.00603642,0.005056462,0.002095415,0.003597303,0.0001983254,0.0005137521],"genre_scores_gemma":[0.9876847,0.002923154,0.002479651,0.001091524,0.00319299,0.0001502489,0.001139441,0.00006682589,0.001271485],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9382223,"threshold_uncertainty_score":0.9995369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05003252555200895,"score_gpt":0.2287798060808477,"score_spread":0.1787472805288388,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}