{"id":"W2109697080","doi":"10.1128/aac.00688-09","title":"Complete Nucleotide Sequences of Plasmids pEK204, pEK499, and pEK516, Encoding CTX-M Enzymes in Three Major <i>Escherichia coli</i> Lineages from the United Kingdom, All Belonging to the International O25:H4-ST131 Clone","year":2009,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":286,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"AstraZeneca","keywords":"Plasmid; Biology; Escherichia coli; Integron; Genetics; Gene; clone (Java method); Microbiology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002417379,0.0008186966,0.0006625582,0.001043606,0.0004005645,0.0005515263,0.0005708886,0.0006176441,0.003265845],"category_scores_gemma":[0.001044073,0.0005178205,0.0006719339,0.001851611,0.0004268126,0.0003735377,0.0003531695,0.0009818152,0.003939628],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007846368,"about_ca_system_score_gemma":0.0007023076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004747686,"about_ca_topic_score_gemma":0.006811811,"domain_scores_codex":[0.9995961,0.00006294279,0.0000817786,0.0000915428,0.00009887486,0.00006887585],"domain_scores_gemma":[0.9992058,0.0002138113,0.0002068083,0.0001030177,0.0001655712,0.0001051068],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001235631,0.0002010228,0.004370829,0.0006936443,0.0000297488,0.00051426,0.000570085,0.0005100649,0.97447,0.0007146334,0.001316463,0.01537365],"study_design_scores_gemma":[0.0009131305,0.002869656,0.3109679,0.0005438203,0.0005595529,0.003891118,0.001075232,0.00245555,0.4901778,0.0009312705,0.1853753,0.0002396458],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.8309277,0.00288613,0.02223541,0.0004449393,0.0001880434,0.001363293,0.1329029,0.0003317054,0.008719805],"genre_scores_gemma":[0.5027501,0.001711838,0.04004584,0.0002606829,0.00004764751,0.00091704,0.4445215,0.0002292465,0.009516139],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.004747686,"threshold_uncertainty_score":0.01092541,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01996378335883875,"score_gpt":0.261102639463363,"score_spread":0.2411388561045243,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}