{"id":"W2109793526","doi":"10.1093/hmg/ddq133","title":"In silico replication of the genome-wide association results of the Type 1 Diabetes Genetics Consortium","year":2010,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":18,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Canadian Institutes of Health Research","keywords":"Population stratification; Biology; Genome-wide association study; Genetics; Genetic association; Transmission disequilibrium test; Linkage disequilibrium; Single-nucleotide polymorphism; Population; Genotype; Demography; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.04177293,0.002579865,0.002184652,0.002815218,0.002227249,0.002935091,0.002768808,0.001496384,0.009566011],"category_scores_gemma":[0.07800186,0.000976596,0.007228588,0.004227063,0.0007597838,0.0007655468,0.001679287,0.002230807,0.002479363],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006865577,"about_ca_system_score_gemma":0.003029262,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01014839,"about_ca_topic_score_gemma":0.01263756,"domain_scores_codex":[0.9676142,0.0198185,0.001790488,0.007301246,0.002391144,0.001084371],"domain_scores_gemma":[0.9444513,0.03287204,0.002041752,0.0153687,0.004162619,0.001103642],"domain_codex":null,"domain_gemma":"reproducibility","domain_candidate":"reproducibility","domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.009552806,0.001221361,0.8137483,0.002354993,0.03950986,0.005611364,0.001511297,0.02227519,0.03350309,0.004124373,0.0212756,0.04531173],"study_design_scores_gemma":[0.01374389,0.003819468,0.724691,0.0004691545,0.04173598,0.009611509,0.001093187,0.1168518,0.02881779,0.0155239,0.04306145,0.0005809789],"study_design_candidate":"simulation_or_modeling","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.7923906,0.003569605,0.1522215,0.002030574,0.002420723,0.001307434,0.03744599,0.001818982,0.006794557],"genre_scores_gemma":[0.9282633,0.000480272,0.03120052,0.0007274472,0.0001822368,0.0009885168,0.03604719,0.0005012298,0.001609151],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9582271,"threshold_uncertainty_score":0.220919,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005700201618135559,"score_gpt":0.2313849994180985,"score_spread":0.2256847977999629,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}