{"id":"W2109848832","doi":"10.1093/toxsci/kft153","title":"Differential Expression of Long Noncoding RNAs in the Livers of Female B6C3F1 Mice Exposed to the Carcinogen Furan","year":2013,"lang":"en","type":"article","venue":"Toxicological Sciences","topic":"Cancer-related molecular mechanisms research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"Carleton University; Health Canada","funders":"Natural Sciences and Engineering Research Council of Canada; Health Canada; Agilent Technologies","keywords":"Epigenetics; Gene; Biology; Gene expression; RNA; Carcinogen; Messenger RNA; Genome; Regulation of gene expression; Molecular biology; DNA methylation; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004530379,0.00008566523,0.000118503,0.00004359476,0.0001157688,0.00002850908,0.0007935903,0.000101967,0.0002049472],"category_scores_gemma":[0.0001638881,0.00004242843,0.00006965707,0.0002990365,0.0002970188,0.000005722379,0.0002632868,0.0001069732,0.000005895076],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001339131,"about_ca_system_score_gemma":0.00005097919,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001227388,"about_ca_topic_score_gemma":0.0001283484,"domain_scores_codex":[0.9987102,0.000222416,0.0001835146,0.000261986,0.0003618666,0.0002599728],"domain_scores_gemma":[0.9995562,0.00006947555,0.00006991768,0.0001993294,0.00005173072,0.00005332069],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002937598,0.00005534502,0.0006616871,0.000005143107,0.000003214339,0.000001715065,0.0002722632,0.0003611948,0.9960513,0.00003397104,0.0001157707,0.002409052],"study_design_scores_gemma":[0.000177968,0.0007086035,0.01264336,0.00001624259,0.000003858887,0.000002911738,0.000987983,0.0001613615,0.9850836,0.00003096321,0.000119276,0.00006389607],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9963775,0.0001645629,0.001705277,0.0005044338,0.00006195425,0.0004726179,0.00000324629,0.000002576045,0.0007077888],"genre_scores_gemma":[0.9994203,0.00004087604,0.0002387528,0.0001558255,0.00004797632,0.00004581968,0.000002260753,0.000003014175,0.00004518703],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01198168,"threshold_uncertainty_score":0.2244028,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03970757405843003,"score_gpt":0.3000410595188054,"score_spread":0.2603334854603754,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}