{"id":"W2110105488","doi":"10.1093/hmg/ddh195","title":"Comprehensive whole genome array CGH profiling of mantle cell lymphoma model genomes","year":2004,"lang":"en","type":"article","venue":"Human Molecular Genetics","topic":"Lymphoma Diagnosis and Treatment","field":"Medicine","cited_by":122,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Cancer Agency","funders":"Genome British Columbia; Genome Canada; Lymphoma Research Foundation","keywords":"Comparative genomic hybridization; Biology; Mantle cell lymphoma; Genome; Genetics; Copy number analysis; Copy-number variation; Gene expression profiling; Gene duplication; Microarray; Gene dosage; Computational biology; Lymphoma; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001045792,0.0002091815,0.000235117,0.000387345,0.0001385455,0.0002444634,0.0001718856,0.0002235841,0.0006679358],"category_scores_gemma":[0.0001184027,0.0001044573,0.0002476913,0.0003712596,0.00009782243,0.000103098,0.0001899509,0.0002847863,0.0001589133],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002216642,"about_ca_system_score_gemma":0.0001275149,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001111646,"about_ca_topic_score_gemma":0.002086419,"domain_scores_codex":[0.9998753,0.00001346464,0.000004582092,0.00004445432,0.00003917083,0.00002297383],"domain_scores_gemma":[0.9999486,0.00001324419,0.00001185667,0.00001013612,0.000009056273,0.000007139017],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00004087988,0.00001199538,0.0006641104,0.00001557593,0.000008553475,0.00001487891,0.00001313567,0.0004175056,0.997036,0.00004474692,0.00005498986,0.001677595],"study_design_scores_gemma":[0.00002154718,0.0005588816,0.06648782,0.000005069787,0.0001136796,0.0003348476,0.00009547968,0.01277195,0.9139141,0.0002598673,0.005416085,0.00002065799],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9792483,0.0006054122,0.01478033,0.00004691794,0.000008673973,0.00004487029,0.003915388,0.0002795013,0.001070673],"genre_scores_gemma":[0.9719073,0.0005737173,0.01625017,0.00008452728,0.000005097283,0.0001326042,0.008969131,0.00006804679,0.002009329],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001111646,"threshold_uncertainty_score":0.002234459,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02282231987765972,"score_gpt":0.2647866558073722,"score_spread":0.2419643359297124,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}