{"id":"W2110418684","doi":"10.1128/aac.02428-14","title":"Characteristics of Escherichia coli Sequence Type 131 Isolates That Produce Extended-Spectrum β-Lactamases: Global Distribution of the <i>H</i> 30-Rx Sublineage","year":2014,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antibiotic Resistance in Bacteria","field":"Biochemistry, Genetics and Molecular Biology","cited_by":81,"is_retracted":false,"has_abstract":true,"ca_institutions":"Calgary Laboratory Services; University of Calgary","funders":"Utah Agricultural Experiment Station","keywords":"Phylogenetic tree; Escherichia coli; Biology; Lineage (genetic); Multilocus sequence typing; Multiple drug resistance; Microbiology; Antibiotic resistance; Plasmid; Phylogenetics; Genetics; Virology; Drug resistance; Gene; Antibiotics; Genotype","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002937622,0.0003501245,0.0003091396,0.0009268342,0.0001811832,0.0003870691,0.0001350364,0.0002373765,0.0005658218],"category_scores_gemma":[0.0006728689,0.0001462733,0.0002083864,0.001042881,0.0002458624,0.0003066615,0.0002752592,0.000163665,0.0001834733],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002005151,"about_ca_system_score_gemma":0.0002084965,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003181435,"about_ca_topic_score_gemma":0.003767795,"domain_scores_codex":[0.9996943,0.00004728394,0.00003840193,0.0001036267,0.00006493976,0.00005144846],"domain_scores_gemma":[0.9992357,0.0001091002,0.0003124621,0.00005076785,0.0001787777,0.0001131823],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0002257089,0.00004933324,0.9435322,0.00003488443,0.00004047745,0.0002191206,0.0002969784,0.000128228,0.05104313,0.00001501676,0.00005689692,0.004358014],"study_design_scores_gemma":[0.000005182882,0.0002777994,0.996196,0.000003227567,0.00002003114,0.0006597766,0.0001887783,0.00009136883,0.002251448,0.000007427889,0.0002939515,0.000004947333],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9993743,0.00006505843,0.0001178024,0.000003966989,8.16893e-7,0.00001209387,0.0002159272,0.000001963164,0.0002080709],"genre_scores_gemma":[0.9982709,0.0001360654,0.0004255171,0.00001824405,0.000006205663,0.00001312817,0.0009810474,0.000003922577,0.0001449207],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003181435,"threshold_uncertainty_score":0.006325841,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.009538348436924193,"score_gpt":0.2396741981809189,"score_spread":0.2301358497439947,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}