{"id":"W2110498187","doi":"10.3732/ajb.0900384","title":"Inferring the higher‐order phylogeny of mosses (Bryophyta) and relatives using a large, multigene plastid data set","year":2011,"lang":"en","type":"article","venue":"American Journal of Botany","topic":"Bryophyte Studies and Records","field":"Agricultural and Biological Sciences","cited_by":114,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"","keywords":"Biology; Clade; Phylogenetic tree; Maximum parsimony; Sister group; Bryophyte; Evolutionary biology; Phylogenetics; Taxon; Phylogenomics; Supermatrix; Botany; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002329362,0.0005414942,0.0005655214,0.001215731,0.0008648637,0.001525804,0.0005574405,0.0006861063,0.001020605],"category_scores_gemma":[0.00531648,0.0004106066,0.0005825981,0.000833687,0.0003905126,0.002093765,0.000783801,0.001025052,0.0007039299],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004423685,"about_ca_system_score_gemma":0.0006471345,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001466136,"about_ca_topic_score_gemma":0.004479774,"domain_scores_codex":[0.9993166,0.0002013126,0.00005208608,0.0002909526,0.00009076519,0.00004837178],"domain_scores_gemma":[0.9959652,0.002093795,0.0008568165,0.0005757976,0.0002382825,0.0002699509],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003827753,0.000159052,0.6731754,0.0007540071,0.0006865811,0.0006503051,0.001268486,0.01869618,0.2364602,0.00154244,0.0004207253,0.06580389],"study_design_scores_gemma":[0.00005546918,0.0002743012,0.8451777,0.0003086528,0.0004919636,0.001784455,0.001695623,0.1026352,0.0312133,0.008520663,0.007734615,0.0001079257],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9778159,0.0006945847,0.01994493,0.000158821,0.00000620693,0.00001583939,0.0007909234,0.0001001023,0.0004728365],"genre_scores_gemma":[0.9722745,0.0002982267,0.02559363,0.00006872322,0.00001371976,0.00001556742,0.001545386,0.0000325392,0.0001577525],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002329362,"threshold_uncertainty_score":0.01231903,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09235701748700961,"score_gpt":0.2709229817134233,"score_spread":0.1785659642264137,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}