{"id":"W2111095712","doi":"10.1016/j.actatropica.2013.06.012","title":"Novel genetic diversity within Anopheles punctimacula s.l.: Phylogenetic discrepancy between the Barcode cytochrome c oxidase I (COI) gene and the rDNA second internal transcribed spacer (ITS2)","year":2013,"lang":"en","type":"article","venue":"Acta Tropica","topic":"Malaria Research and Control","field":"Medicine","cited_by":31,"is_retracted":false,"has_abstract":false,"ca_institutions":"McGill University","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; Smithsonian Tropical Research Institute; Secretaría Nacional de Ciencia, Tecnología e Innovación; California Health Care Safety Net Institute; National Institutes of Health; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Paraphyly; Internal transcribed spacer; Phylogenetic tree; Evolutionary biology; DNA barcoding; Molecular phylogenetics; Species complex; Phylogenetics; Genetics; Genetic diversity; Mitochondrial DNA; Clade; Gene; Population","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002204983,0.0002031134,0.0002171316,0.001020273,0.0005281923,0.0004803185,0.0001901216,0.0003441072,0.0009846349],"category_scores_gemma":[0.0002712883,0.0001410044,0.0001805496,0.0006564163,0.000412615,0.0002614965,0.0003154616,0.0003195757,0.0002247907],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003290667,"about_ca_system_score_gemma":0.0002027949,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001994184,"about_ca_topic_score_gemma":0.003434048,"domain_scores_codex":[0.9998384,0.0000337888,0.00001133191,0.00005587677,0.00002864494,0.00003203062],"domain_scores_gemma":[0.9997311,0.00004668325,0.0001048723,0.00001753551,0.0000465367,0.00005331364],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0007290025,0.000203268,0.200253,0.0001998938,0.0001069136,0.001293413,0.004171582,0.0004083515,0.7505877,0.0007685474,0.0002629558,0.04101539],"study_design_scores_gemma":[0.00002842551,0.0003273672,0.9803377,0.00004613525,0.00006723979,0.004751862,0.001035769,0.001064642,0.009040242,0.0003116998,0.002956447,0.00003230514],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9990139,0.0001715729,0.0002617108,0.00002747311,0.000002135681,0.000003707678,0.00009149699,0.000005299196,0.0004226808],"genre_scores_gemma":[0.9992405,0.0000666497,0.0003695864,0.00001877293,0.000005902079,0.000003941416,0.0001408351,0.000001602386,0.0001520821],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001994184,"threshold_uncertainty_score":0.003965199,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01529373470729013,"score_gpt":0.2300783025817832,"score_spread":0.2147845678744931,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}