{"id":"W2111698215","doi":"10.1128/iai.00856-09","title":"<i>Rhodococcus equi</i>Virulence-Associated Protein A Is Required for Diversion of Phagosome Biogenesis but Not for Cytotoxicity","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Infectious Disease Case Reports and Treatments","field":"Medicine","cited_by":49,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Virulence; Biology; Rhodococcus equi; Phagosome; Cytotoxicity; Microbiology; Biogenesis; Phagocytosis; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002541309,0.0001602479,0.0003276779,0.0001291115,0.0003328356,0.00001690917,0.0000233289,0.000130906,0.00003308994],"category_scores_gemma":[0.0002556363,0.0001388749,0.0002347334,0.0001589337,0.00005961413,0.0001290673,0.00001991095,0.0000668811,0.000001906095],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001300865,"about_ca_system_score_gemma":0.00008185426,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009413051,"about_ca_topic_score_gemma":0.00001030409,"domain_scores_codex":[0.9991284,0.00004690708,0.0002925884,0.0001987231,0.0001298486,0.0002035461],"domain_scores_gemma":[0.9990571,0.00005539906,0.0002359339,0.0002000748,0.0003453678,0.0001061385],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.003022319,0.003394085,0.0615178,0.0004880562,0.000655634,0.00001826378,0.0003562595,0.000002336125,0.9092423,0.0002130552,0.000431158,0.02065875],"study_design_scores_gemma":[0.006809137,0.003903298,0.2919347,0.0002262569,0.0005427489,0.00004273266,0.00003718722,0.0002132308,0.6946754,0.000729482,0.0006662123,0.0002196374],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9964734,0.00008463738,0.0006365876,0.0001376144,0.00008695333,0.001909824,0.0002723261,0.00007800816,0.000320645],"genre_scores_gemma":[0.9989128,0.0001001028,0.00007862535,0.000346267,0.00003517311,0.0001238822,0.0001147374,0.00001175794,0.0002767309],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2304168,"threshold_uncertainty_score":0.5663156,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03711406919320507,"score_gpt":0.3038787463108166,"score_spread":0.2667646771176115,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}