{"id":"W2111821454","doi":"10.1371/journal.pone.0113504","title":"The Xylella fastidiosa PD1063 Protein Is Secreted in Association with Outer Membrane Vesicles","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Phytoplasmas and Hemiptera pathogens","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"Okanagan University College; University of British Columbia, Okanagan Campus; University of British Columbia","funders":"California Department of Food and Agriculture; U.S. Department of Agriculture","keywords":"Xylella fastidiosa; Biology; Bacterial outer membrane; Xanthomonas; Microbiology; Xylem; Biofilm; Mutant; Xanthomonas oryzae; Vesicle; Cell wall; Bacteria; Pathogen; Botany; Biochemistry; Escherichia coli; Membrane; Genetics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002607256,0.00008683038,0.0001338944,0.000005150489,0.0001407756,0.00006554601,0.0001245277,0.0000635732,0.00006925651],"category_scores_gemma":[0.00005913537,0.00002663128,0.00002697745,0.0001472636,0.00001794738,0.00005833754,0.00002461449,0.0001050132,0.00004402014],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002922385,"about_ca_system_score_gemma":0.000003501308,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002267681,"about_ca_topic_score_gemma":0.0006906679,"domain_scores_codex":[0.9991454,0.0000699327,0.0001263294,0.0001664667,0.0002652716,0.0002265353],"domain_scores_gemma":[0.9996291,0.0001454945,0.00008211805,0.0000506272,0.0000497177,0.00004292369],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000311533,0.0001028315,0.1027193,0.000007398401,0.00002524751,0.000001173545,0.00008131601,4.384072e-7,0.893289,0.00006766928,0.0000549092,0.003619594],"study_design_scores_gemma":[0.0002659931,0.0002845152,0.1564415,0.0001162846,0.0000228028,6.13906e-7,0.00006559798,0.0004742588,0.8377103,0.0003570389,0.004076689,0.0001843681],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9939691,0.00002220629,6.071842e-7,0.004422095,0.000009376024,0.0002222449,0.00001549442,0.00002950774,0.001309375],"genre_scores_gemma":[0.9985064,0.00001833851,0.0001118811,0.0002120252,0.000193791,0.00003794573,0.0000113487,9.499187e-7,0.0009073244],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0555787,"threshold_uncertainty_score":0.1085992,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01925277466158541,"score_gpt":0.1700058000494976,"score_spread":0.1507530253879122,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}