{"id":"W2111989712","doi":"10.1093/glycob/cws094","title":"Cell surface glycoproteins from Thermoplasma acidophilum are modified with an N-linked glycan containing 6-C-sulfofucose†","year":2012,"lang":"en","type":"article","venue":"Glycobiology","topic":"Glycosylation and Glycoproteins Research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":30,"is_retracted":false,"has_abstract":true,"ca_institutions":"National Research Council Canada","funders":"","keywords":"Thermoplasma acidophilum; Glycoprotein; Biochemistry; Chemistry; Glycan; Trypsin; PNGase F; Peptide sequence; Fucose; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009142544,0.0005343556,0.0002188029,0.0001854014,0.0001874164,0.0002526399,0.0001703564,0.0003070213,0.0003999528],"category_scores_gemma":[0.0001385555,0.0001134499,0.0002884876,0.000248666,0.0001315502,0.0001390793,0.000234111,0.0002929877,0.0002272753],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001688248,"about_ca_system_score_gemma":0.0001426376,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001250279,"about_ca_topic_score_gemma":0.000871923,"domain_scores_codex":[0.999939,0.000009483835,0.00000607833,0.00001005603,0.00001956604,0.00001581814],"domain_scores_gemma":[0.9999321,0.000009632161,0.00001643296,0.00001083882,0.00001419458,0.00001685508],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00008763611,0.00000662477,0.0004712848,0.00003234666,0.000006176325,0.0000977973,0.00003236505,0.0000205114,0.9985449,0.00002634612,0.00002091842,0.0006530767],"study_design_scores_gemma":[0.00001763002,0.0003125273,0.05610121,0.00003126587,0.00005781274,0.001377093,0.0002049552,0.001028653,0.9337684,0.0001369555,0.006943029,0.00002056295],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9970279,0.0005718914,0.001074365,0.00006503666,0.00001766571,0.00001674763,0.0006028505,0.00001881041,0.000604704],"genre_scores_gemma":[0.9901958,0.000771224,0.003334383,0.00008372787,0.00001616145,0.00002532932,0.003799364,0.0000275706,0.001746466],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001250279,"threshold_uncertainty_score":0.002485991,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02100096084954766,"score_gpt":0.2583196178857578,"score_spread":0.2373186570362101,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}