{"id":"W2111996375","doi":"10.1128/jcm.02366-06","title":"Use of Sequence Analysis of the NS5B Region for Routine Genotyping of Hepatitis C Virus with Reference to C/E1 and 5′ Untranslated Region Sequences","year":2007,"lang":"en","type":"article","venue":"Journal of Clinical Microbiology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":286,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hôpital du Sacré-Cœur de Montréal; Hôpital Maisonneuve-Rosemont; Jewish General Hospital; Hôpital Saint-Luc; Centre Hospitalier de l’Université de Montréal; Royal Victoria Hospital; Institut National de Santé Publique du Québec","funders":"","keywords":"NS5B; Genotype; Genotyping; Biology; Virology; Untranslated region; Phylogenetic tree; Hepatitis C virus; Genetics; Sequence analysis; Five prime untranslated region; Hepacivirus; Virus; RNA; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007766182,0.0003879903,0.0002591481,0.001430206,0.0005219996,0.0003678097,0.0002636912,0.0002901346,0.001271455],"category_scores_gemma":[0.001535888,0.0001819241,0.0002423428,0.001179612,0.0003226819,0.0001081188,0.0001232477,0.0002728603,0.000556034],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008708125,"about_ca_system_score_gemma":0.001466272,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.1440638,"about_ca_topic_score_gemma":0.2903062,"domain_scores_codex":[0.9994196,0.0001260537,0.00004349483,0.0001100503,0.0002288508,0.00007204729],"domain_scores_gemma":[0.9991116,0.0001927341,0.0001396879,0.00008304549,0.0004095227,0.00006348262],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004047871,0.00008229264,0.1914254,0.0002855585,0.00006588335,0.0005162921,0.0008667239,0.0003640366,0.7426507,0.0001638551,0.000679693,0.06249481],"study_design_scores_gemma":[0.00003746655,0.0006107055,0.8669788,0.0001111711,0.00009516178,0.002435159,0.0004111958,0.003652514,0.1128048,0.00008439506,0.01274187,0.00003675986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9710737,0.001881891,0.01737588,0.0001402334,0.00005021075,0.000405605,0.002962932,0.0001438935,0.005965559],"genre_scores_gemma":[0.9273787,0.001475642,0.06313928,0.0002707527,0.00001828445,0.0002246613,0.003781655,0.00003420176,0.003676693],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1440638,"threshold_uncertainty_score":0.2864504,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.2540727936695885,"score_gpt":0.445895801991301,"score_spread":0.1918230083217125,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}