{"id":"W2112098552","doi":"10.1128/aem.02363-15","title":"Abundance of Antibiotic Resistance Genes in Bacteriophage following Soil Fertilization with Dairy Manure or Municipal Biosolids, and Evidence for Potential Transduction","year":2015,"lang":"en","type":"article","venue":"Applied and Environmental Microbiology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":126,"is_retracted":false,"has_abstract":true,"ca_institutions":"Western University; Agriculture and Agri-Food Canada","funders":"Agriculture and Agri-Food Canada","keywords":"Bacteriophage; Resistome; Biosolids; Antibiotic resistance; Biology; Context (archaeology); Manure; Bacteria; Microbiology; Antibiotics; Soil microbiology; Agronomy; Biotechnology; Escherichia coli; Integron; Environmental science; Gene; Environmental engineering; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002835369,0.0002691757,0.0002537944,0.0002761571,0.0002150292,0.0004377726,0.0001474216,0.0004609327,0.001063359],"category_scores_gemma":[0.0007100631,0.0001313373,0.000253775,0.0002707901,0.0002930458,0.000228413,0.0002447568,0.0003653219,0.0001672442],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002181803,"about_ca_system_score_gemma":0.0002982142,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001302381,"about_ca_topic_score_gemma":0.00167068,"domain_scores_codex":[0.9996381,0.00005429119,0.00002426226,0.0001172511,0.00008110119,0.0000848605],"domain_scores_gemma":[0.9994313,0.0001960609,0.0001573448,0.00003757938,0.0001045489,0.00007300761],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001376865,0.00002593171,0.003335863,0.0000283222,0.000004685844,0.00001644681,0.00003830116,0.00001601789,0.9954103,0.00001374773,0.000007896597,0.0009648278],"study_design_scores_gemma":[0.00001260011,0.0009870394,0.2096029,0.00002003031,0.00003501867,0.0001960837,0.0005385214,0.0007676364,0.7866814,0.0001472281,0.0009978312,0.00001390079],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9978845,0.000296895,0.001073741,0.00002425044,0.000009240558,0.0000163919,0.0002543382,0.00001264749,0.0004279971],"genre_scores_gemma":[0.9956257,0.0001980901,0.002065044,0.00005515666,0.000007590253,0.0000675885,0.00044798,0.0000120998,0.00152076],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001302381,"threshold_uncertainty_score":0.003557265,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01954482851445589,"score_gpt":0.2377087881836318,"score_spread":0.218163959669176,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}