{"id":"W2112292502","doi":"10.1109/cibcb.2005.1594905","title":"Selected String Representation for Whole Genomes","year":2005,"lang":"en","type":"article","venue":"","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":0,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Alberta","funders":"","keywords":"Genome; String (physics); Phylogenetic tree; Computer science; Vertebrate; Sequence (biology); Phylogenetics; Computational biology; Representation (politics); Prokaryote; Biology; Evolutionary biology; Theoretical computer science; Genetics; Mathematics; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000521194,0.0006820952,0.0004792516,0.001766486,0.0003486909,0.001119231,0.0007768902,0.0008217687,0.01506176],"category_scores_gemma":[0.00393957,0.0001586318,0.0005671568,0.003914414,0.0002043079,0.001367882,0.0007110366,0.000677111,0.005615409],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003712932,"about_ca_system_score_gemma":0.0004914407,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0005219056,"about_ca_topic_score_gemma":0.0005509342,"domain_scores_codex":[0.9994088,0.0001737654,0.00005959177,0.0001230557,0.0001895524,0.00004526495],"domain_scores_gemma":[0.9989175,0.0004202061,0.0001036463,0.0002916046,0.0002301208,0.00003708326],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.001260723,0.0001586468,0.001688645,0.001032136,0.00009650885,0.0006212281,0.000197061,0.04509541,0.03707113,0.07653393,0.06622879,0.7700158],"study_design_scores_gemma":[0.0002421422,0.0005184827,0.003448253,0.0002196648,0.000102573,0.001439376,0.0001834687,0.6239015,0.03347801,0.1937934,0.142599,0.00007394564],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.05910338,0.001551856,0.8911803,0.0009591667,0.0004893378,0.0002111157,0.02079443,0.01533118,0.01037928],"genre_scores_gemma":[0.2969476,0.001472883,0.6268637,0.0003972681,0.0002578069,0.0006527902,0.06188463,0.001099253,0.01042408],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.01506176,"threshold_uncertainty_score":0.05038661,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01589610232236445,"score_gpt":0.2657566054934563,"score_spread":0.2498605031710919,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}