{"id":"W2112295728","doi":"10.1534/g3.113.009597","title":"Extensive Cotransformation of Natural Variation into Chromosomes of Naturally Competent <i>Haemophilus influenzae</i>","year":2014,"lang":"en","type":"article","venue":"G3 Genes Genomes Genetics","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":55,"is_retracted":false,"has_abstract":true,"ca_institutions":"Genome British Columbia; University of British Columbia","funders":"National Institutes of Health; Canadian Institutes of Health Research; Genome British Columbia; Canada's Michael Smith Genome Sciences Centre","keywords":"Biology; Genetics; Homologous recombination; Recombination; Genetic recombination; Gene conversion; Haemophilus influenzae; Gene; Population; Genome; DNA; Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004576707,0.0003238765,0.0002371125,0.0002782299,0.0001779671,0.0002772578,0.0004374098,0.000332473,0.001432266],"category_scores_gemma":[0.0004278274,0.0002095787,0.0003437501,0.0002768847,0.0003226523,0.0001707041,0.0006055877,0.001062339,0.0003473675],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004790088,"about_ca_system_score_gemma":0.0002713944,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001366795,"about_ca_topic_score_gemma":0.002742444,"domain_scores_codex":[0.9995413,0.0001074129,0.0000538398,0.0001256872,0.00009942722,0.00007236209],"domain_scores_gemma":[0.9994629,0.0001912671,0.0001092523,0.0001409855,0.00003253817,0.00006310943],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006392384,0.00005902755,0.0005416345,0.00002519804,0.00001121786,0.00004982645,0.00004141305,0.00008972448,0.9973131,0.0001747372,0.0000257514,0.001604391],"study_design_scores_gemma":[0.00003118741,0.0005641705,0.01455318,0.000006413412,0.00002946422,0.000419822,0.00007008594,0.002158878,0.9786627,0.0001140553,0.003377901,0.00001222313],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9858504,0.0003713279,0.01135123,0.00009012277,0.00005221026,0.0001455812,0.0005497902,0.0001497737,0.001439509],"genre_scores_gemma":[0.9767312,0.000320365,0.01651613,0.00007729578,0.00001557084,0.000121906,0.002559788,0.0001583116,0.003499305],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001432266,"threshold_uncertainty_score":0.004791439,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005300973584444003,"score_gpt":0.2146498500016255,"score_spread":0.2093488764171815,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}