{"id":"W2112418282","doi":"10.1128/genomea.00348-14","title":"High-Quality Draft Whole-Genome Sequences of 162 Salmonella enterica subsp. <i>enterica</i> Serovar Enteritidis Strains Isolated from Diverse Sources in Canada","year":2014,"lang":"en","type":"article","venue":"Genome Announcements","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Ste. Anne's Hospital; Canadian Food Inspection Agency; Provincial Laboratory of Public Health; University of Alberta; University of Guelph; Public Health Agency of Canada","funders":"Hospital for Sick Children; Public Health Agency of Canada; Genome Canada; McGill University","keywords":"Salmonella enterica; Biology; Serotype; Pulsed-field gel electrophoresis; Virulence; Genome; Microbiology; Salmonella; Phage typing; Genetics; Bacteria; Gene; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0007112236,0.001004679,0.0009653092,0.001952444,0.001340306,0.001500976,0.0009929219,0.0005863402,0.002770833],"category_scores_gemma":[0.002942038,0.000568175,0.0009552558,0.005240007,0.0004277012,0.0004874434,0.0007856966,0.001113176,0.001459547],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.004277551,"about_ca_system_score_gemma":0.01842968,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.5325189,"about_ca_topic_score_gemma":0.684912,"domain_scores_codex":[0.9992326,0.0000372207,0.00006479288,0.0001418463,0.0003575271,0.0001660068],"domain_scores_gemma":[0.9974367,0.0001838507,0.000253522,0.0001829358,0.001585516,0.0003575531],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.002911154,0.0002968305,0.0480775,0.003009726,0.0004249142,0.002110588,0.003106875,0.006923868,0.8208982,0.001003237,0.02384606,0.08739108],"study_design_scores_gemma":[0.0003326653,0.0005908684,0.65018,0.000615539,0.0009618695,0.001596111,0.003684741,0.007881822,0.1109939,0.001079576,0.2217649,0.0003179884],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.4674,0.00273432,0.01569925,0.0008719927,0.0002268398,0.0005686478,0.5060248,0.001099614,0.005374518],"genre_scores_gemma":[0.2146089,0.002723508,0.05404342,0.0002944898,0.00004702704,0.0002755835,0.7204219,0.0004388731,0.007146147],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.4674811,"threshold_uncertainty_score":0.9404683,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02400646636001699,"score_gpt":0.2231611735729374,"score_spread":0.1991547072129204,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}