{"id":"W2112899484","doi":"10.1128/iai.72.7.4172-4187.2004","title":"Contribution of Gene Loss to the Pathogenic Evolution of <i>Burkholderia pseudomallei</i> and <i>Burkholderia mallei</i>","year":2004,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Burkholderia infections and melioidosis","field":"Medicine","cited_by":118,"is_retracted":false,"has_abstract":true,"ca_institutions":"Health Sciences Centre; University of Calgary","funders":"U.S. Department of Defense","keywords":"Burkholderia pseudomallei; Biology; Microbiology; Operon; Virulence; Melioidosis; Burkholderia; Gene; Genetics; Arabinose; Mutant; Bacteria; Xylose; Biochemistry","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000579285,0.0001879913,0.0003853125,0.0001909146,0.0002701661,0.00002042182,0.00005573683,0.0001605655,0.00003572874],"category_scores_gemma":[0.0002120824,0.0001471645,0.0001175723,0.0005203837,0.000221476,0.000142946,0.00007685371,0.0002397441,0.000005822154],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001113239,"about_ca_system_score_gemma":0.0001088863,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002537581,"about_ca_topic_score_gemma":0.0001765011,"domain_scores_codex":[0.9988179,0.0001137882,0.0004529653,0.0002188775,0.0001805974,0.0002159096],"domain_scores_gemma":[0.9988102,0.00005084223,0.0001945827,0.0003989045,0.000408554,0.0001368639],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0003475219,0.0004742637,0.0394965,0.0001225192,0.0001390703,0.000002505617,0.000435231,0.0001422215,0.9533363,0.00306572,0.00009495494,0.002343181],"study_design_scores_gemma":[0.00455408,0.001359223,0.7449647,0.0002150898,0.000295614,0.0005935045,0.0002319585,0.0000436418,0.241681,0.0004580314,0.005384695,0.0002185085],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9874506,0.0008037072,0.00953662,0.0007956442,0.0003575796,0.0007019725,0.00003245286,0.00005086434,0.000270586],"genre_scores_gemma":[0.9984134,0.0008626168,0.0003045919,0.0002030179,0.00009492424,0.00004804453,0.00002379031,0.00001709612,0.0000324939],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7116553,"threshold_uncertainty_score":0.6001194,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01083903290471763,"score_gpt":0.2433005506357745,"score_spread":0.2324615177310568,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}