{"id":"W2112951637","doi":"10.1186/s12864-015-1571-8","title":"Comparative analysis of plant carbohydrate active enZymes and their role in xylogenesis","year":2015,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Polysaccharides and Plant Cell Walls","field":"Agricultural and Biological Sciences","cited_by":24,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Department of Science and Technology, Ministry of Science and Technology, India; University of Pretoria; National Research Foundation","keywords":"Biology; Woody plant; Populus trichocarpa; Beta-glucosidase; Biomass (ecology); Botany; Transcriptome; Herbaceous plant; Gene; Genome; Ecology; Gene expression; Genetics; Cellulase; Biochemistry; Enzyme","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000135046,0.0000879856,0.0002861441,0.00003294257,0.00002356781,0.00001377649,0.0001017845,0.00004797323,0.00001581991],"category_scores_gemma":[0.000006998034,0.00003323906,0.00005386082,0.0003107015,0.00002861456,0.00003232662,0.00004334606,0.00003646002,0.000002025263],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002013677,"about_ca_system_score_gemma":0.00001416738,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002311152,"about_ca_topic_score_gemma":0.0245623,"domain_scores_codex":[0.9994729,0.00005733458,0.0001438596,0.000149764,0.00004833977,0.0001278037],"domain_scores_gemma":[0.9996096,0.0001837366,0.00008059123,0.00003337887,0.00002252294,0.00007011548],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001481972,0.00005796058,0.07187075,0.000002441911,0.0001904073,0.000001360441,0.003774054,0.001332848,0.9199669,0.0001522,0.00003505892,0.002467853],"study_design_scores_gemma":[0.0002650412,0.0001913174,0.6285797,0.000008402339,0.0002027612,0.00000267243,0.01415492,0.02169281,0.3311324,0.0006331571,0.00280063,0.0003362136],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9981823,0.0006644675,0.000001892235,0.00001981291,0.00002017986,0.00007990059,0.0007005709,0.00000546744,0.0003254324],"genre_scores_gemma":[0.9996899,0.00007666725,0.00004906489,0.00002204664,0.00002220277,0.000003319685,0.0001124961,2.912829e-7,0.00002395587],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5888345,"threshold_uncertainty_score":0.9932369,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04470327374694431,"score_gpt":0.2217974480073041,"score_spread":0.1770941742603598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}