{"id":"W2113031526","doi":"10.1099/ijs.0.64061-0","title":"Phylogenetic history of plastid-targeted proteins in the peridinin-containing dinoflagellate Heterocapsa triquetra","year":2006,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia; Canadian Institute for Advanced Research","funders":"Canadian Institutes of Health Research; Genome Atlantic; Michael Smith Health Research BC; Genome Canada","keywords":"Plastid; Dinoflagellate; Biology; Peridinin; Lineage (genetic); Phylogenetic tree; Phylogenetics; Evolutionary biology; Algae; Genome; Gene; Horizontal gene transfer; Nuclear gene; Genetics; Botany; Chloroplast","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003795286,0.0001645442,0.0002614903,0.002075335,0.0008457957,0.0007520338,0.00020149,0.0005254611,0.0005534709],"category_scores_gemma":[0.0005330822,0.0002565034,0.0002360262,0.001009039,0.0005130847,0.0004513616,0.0007235569,0.000499687,0.0003130092],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004825493,"about_ca_system_score_gemma":0.0002741103,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001993602,"about_ca_topic_score_gemma":0.003376274,"domain_scores_codex":[0.9997506,0.00003369789,0.00001952571,0.0001110828,0.00003996441,0.0000451807],"domain_scores_gemma":[0.9991211,0.0001594026,0.0002609533,0.00006414505,0.0001848769,0.0002095427],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0006830123,0.00005114167,0.4250169,0.0001356612,0.0001037785,0.0005125625,0.002326258,0.0007151023,0.5478492,0.0005526888,0.00011851,0.02193522],"study_design_scores_gemma":[0.000007017434,0.00008549842,0.9927511,0.00001625307,0.0000323343,0.0008324485,0.000414464,0.0008161522,0.003535257,0.0001441729,0.001353421,0.00001186712],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9985587,0.0004995858,0.0003010943,0.00004114802,0.000001728465,0.000002570148,0.0001007403,0.000008698239,0.0004856726],"genre_scores_gemma":[0.9978641,0.000321823,0.0007215296,0.00004768424,0.000003690711,0.000005450285,0.0006247773,0.000007592256,0.0004033917],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002075335,"threshold_uncertainty_score":0.003964007,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01016570296649089,"score_gpt":0.2040320278671282,"score_spread":0.1938663249006373,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}