{"id":"W2113051934","doi":"10.1128/aac.01756-10","title":"Characterization of a Novel Arginine Catabolic Mobile Element (ACME) and Staphylococcal Chromosomal Cassette <i>mec</i> Composite Island with Significant Homology to Staphylococcus epidermidis ACME Type II in Methicillin-Resistant Staphylococcus aureus Genotype ST22-MRSA-IV","year":2011,"lang":"en","type":"article","venue":"Antimicrobial Agents and Chemotherapy","topic":"Antimicrobial Resistance in Staphylococcus","field":"Medicine","cited_by":96,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Canadian Centre for Applied Research in Cancer Control","keywords":"Methicillin-resistant Staphylococcus aureus; Microbiology; Biology; Staphylococcus aureus; Mobile genetic elements; Multilocus sequence typing; Staphylococcal infections; Staphylococcus epidermidis; SCCmec; Genetics; Genotype; Genome; Gene; Bacteria","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009408953,0.0002137287,0.0003082502,0.0005100833,0.000125479,0.0003525016,0.0001562004,0.0003129913,0.000437946],"category_scores_gemma":[0.0004872999,0.0001534166,0.0002497163,0.0003585687,0.0002319977,0.000152675,0.0002334936,0.0002821572,0.0002325418],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001861187,"about_ca_system_score_gemma":0.0002881687,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002408822,"about_ca_topic_score_gemma":0.002285587,"domain_scores_codex":[0.9998537,0.00001123957,0.00001170281,0.0000455527,0.00004559029,0.00003220653],"domain_scores_gemma":[0.9995765,0.00008645037,0.0001453274,0.00002624631,0.00007467869,0.00009068288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001577418,0.00003319277,0.02749415,0.00004619264,0.00001064868,0.000341704,0.0001361039,0.0000856616,0.9679943,0.00002393368,0.00003303229,0.003643322],"study_design_scores_gemma":[0.00001790509,0.0006603791,0.7862713,0.00002097696,0.00004643298,0.004592214,0.0005971433,0.001244348,0.2032637,0.00005196131,0.003202294,0.00003142849],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.998283,0.0001792645,0.0007207515,0.00002541384,0.000004785711,0.00001839603,0.0004884289,0.000008519167,0.0002713937],"genre_scores_gemma":[0.9948147,0.0001779974,0.002052888,0.0000389289,0.000009534134,0.00002997059,0.001892917,0.000007812452,0.0009752656],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002408822,"threshold_uncertainty_score":0.004789591,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02168150240229225,"score_gpt":0.264878680116892,"score_spread":0.2431971777145998,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}