{"id":"W2113405895","doi":"10.1186/1759-8753-5-1","title":"Impact of ploidy level on the distribution of Pokey element insertions in the Daphnia pulex complex","year":2014,"lang":"en","type":"article","venue":"Mobile DNA","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":26,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université Laval; Center for Northern Studies; University of Guelph; Université du Québec à Rimouski","funders":"Natural Sciences and Engineering Research Council of Canada; Université du Québec à Rimouski; University of Guelph","keywords":"Biology; Daphnia pulex; Ploidy; Polyploid; Transposable element; Genetics; Genome; Population; Parthenogenesis; Genome evolution; Hybrid; Evolutionary biology; Daphnia; Zoology; Botany; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002282122,0.00005805666,0.00008221532,0.000004437291,0.00009152015,0.000009907333,0.0001923138,0.00002424997,0.000333733],"category_scores_gemma":[0.00004259922,0.00001486471,0.00007783635,0.0002225855,0.00004272653,0.00001487585,0.00002475032,0.00004707285,0.000008273677],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001704282,"about_ca_system_score_gemma":0.000005331389,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007572065,"about_ca_topic_score_gemma":0.0006930818,"domain_scores_codex":[0.9994027,0.0001118779,0.0001667006,0.00008502903,0.0001319355,0.0001017793],"domain_scores_gemma":[0.9995856,0.0002212276,0.000069058,0.00007347938,0.00003435566,0.00001630266],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00004704164,0.001492549,0.1081322,0.000007602983,0.00003900206,2.8702e-7,0.0008771805,0.001037519,0.8365339,0.01563884,0.002667486,0.03352636],"study_design_scores_gemma":[0.00007558021,0.0005211755,0.9936197,0.000007022843,0.000004733425,4.850671e-7,0.0001546808,0.000310403,0.001712737,0.0008102857,0.002746173,0.0000369693],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9979861,0.000006562636,0.000009567305,0.001015592,0.0000144091,0.0002429865,0.0003670462,0.000004591252,0.0003531468],"genre_scores_gemma":[0.9996124,0.000004654385,0.00000463096,0.00006358158,0.00003867298,0.00004576311,0.0002140845,2.880923e-7,0.00001594175],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8854876,"threshold_uncertainty_score":0.3654143,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05214924692223264,"score_gpt":0.2654027003373862,"score_spread":0.2132534534151536,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}