{"id":"W2113438490","doi":"10.1128/jvi.79.7.4396-4406.2005","title":"TFII-I Regulates Induction of Chromosomally Integrated Human Immunodeficiency Virus Type 1 Long Terminal Repeat in Cooperation with USF","year":2005,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"Toronto Metropolitan University; University of British Columbia","funders":"National Institute of Allergy and Infectious Diseases; Natural Sciences and Engineering Research Council of Canada; National Institutes of Health; Michael Smith Health Research BC","keywords":"Biology; Jurkat cells; HIV Long Terminal Repeat; Long terminal repeat; Transcription factor; Transcription (linguistics); Molecular biology; Response element; Recombinant DNA; Ionomycin; Virology; Cell biology; T cell; Promoter; Gene; Genetics; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001511696,0.0005955845,0.0002746471,0.0003098835,0.0001990863,0.0004234159,0.0002202197,0.0002137108,0.002366536],"category_scores_gemma":[0.0001918234,0.0001754875,0.0002951794,0.0001125317,0.0002222247,0.0001319748,0.0003367267,0.000326664,0.001166611],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000714891,"about_ca_system_score_gemma":0.0002072889,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001669084,"about_ca_topic_score_gemma":0.001719245,"domain_scores_codex":[0.999788,0.00003606434,0.00001326563,0.00005170937,0.00003736312,0.00007373674],"domain_scores_gemma":[0.999781,0.00003497189,0.0000461115,0.00001429758,0.0000327926,0.00009083942],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009069877,0.00001881532,0.0002715694,0.0000195538,0.000002115572,0.00004938247,0.0000196874,0.00001866321,0.9987815,0.0000645953,0.0001185044,0.0005447724],"study_design_scores_gemma":[0.00002733416,0.000138779,0.01847514,0.00001660201,0.00001251218,0.0003224945,0.00006349015,0.002003768,0.9747325,0.00005957203,0.004138954,0.000008898382],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9886872,0.003291014,0.002999148,0.0001453724,0.0001003308,0.00003243943,0.00083194,0.0004406201,0.003472045],"genre_scores_gemma":[0.9930247,0.0005094043,0.001233872,0.00006134579,0.00002485496,0.00003355348,0.001165887,0.00006641138,0.003879979],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002366536,"threshold_uncertainty_score":0.007916868,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01309838513714999,"score_gpt":0.2714004500756382,"score_spread":0.2583020649384882,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}