{"id":"W2113541807","doi":"10.1261/rna.042440.113","title":"Novel RNA structural features of an alternatively splicing group II intron from <i>Clostridium tetani</i>","year":2014,"lang":"en","type":"article","venue":"RNA","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Canadian Institutes of Health Research","keywords":"Biology; Group II intron; Intron; Ribozyme; RNA splicing; Exon; Group I catalytic intron; Mammalian CPEB3 ribozyme; Genetics; VS ribozyme; Gene; RNA; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001475672,0.0001790637,0.0002051831,0.00002844972,0.00009469211,0.00002194705,0.0003088586,0.0001417279,0.00003435974],"category_scores_gemma":[0.00007330404,0.0001550608,0.00008598648,0.00004064513,0.00004876673,0.000009596647,0.0001279149,0.00008812235,0.000002461246],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009680859,"about_ca_system_score_gemma":0.00001615736,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003713203,"about_ca_topic_score_gemma":0.00006511139,"domain_scores_codex":[0.9990239,0.00006476277,0.0001986345,0.0003420904,0.0001633474,0.0002072728],"domain_scores_gemma":[0.9993234,0.00001669981,0.0001579962,0.0003671211,0.00005272773,0.00008208551],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009846313,0.00002697875,0.0000415928,0.000007537,0.00004375783,6.21311e-7,0.00005071362,0.00001347633,0.972914,0.0006551995,0.00006772178,0.02607989],"study_design_scores_gemma":[0.0004305317,0.0004699013,0.002264557,0.00002316736,0.00002218862,0.000005947974,0.00003003785,0.00007394252,0.9935531,0.001050232,0.001886743,0.0001896517],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9908924,0.000261975,0.007173623,0.00008055648,0.0002639963,0.0001301035,0.00007178323,0.00001372514,0.001111804],"genre_scores_gemma":[0.9903796,0.00002279785,0.00838773,0.0001958631,0.0006987402,0.000006548348,0.0001084466,0.00002673972,0.0001735277],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02589024,"threshold_uncertainty_score":0.6323198,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007368778241251615,"score_gpt":0.2291584286958012,"score_spread":0.2217896504545495,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}