{"id":"W2113778581","doi":"10.1093/nar/gkt803","title":"Suppression of HPV-16 late L1 5′-splice site SD3632 by binding of hnRNP D proteins and hnRNP A2/B1 to upstream AUAGUA RNA motifs","year":2013,"lang":"en","type":"article","venue":"Nucleic Acids Research","topic":"T-cell and Retrovirus Studies","field":"Immunology and Microbiology","cited_by":47,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Technological University Dublin; Vetenskapsrådet; University of Toronto; Cancerfonden","keywords":"Biology; RNA-binding protein; RNA; Binding site; Molecular biology; RNA splicing; Genetics; DNA-binding protein; Gene; Transcription factor","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":["insufficient_payload"],"category_scores_codex":[0.0006823291,0.0002348081,0.0005047132,0.0003518677,0.0004288757,0.00002237483,0.0004255723,0.0003540162,0.001714436],"category_scores_gemma":[0.0001985484,0.0001738873,0.0000900801,0.0004345249,0.0007920685,0.0001492159,0.000825653,0.0006592379,0.0008941777],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000687249,"about_ca_system_score_gemma":0.00005473044,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002856189,"about_ca_topic_score_gemma":0.00005331542,"domain_scores_codex":[0.9976889,0.0003773334,0.0004399734,0.0004881872,0.0002112908,0.0007943382],"domain_scores_gemma":[0.9986896,0.0002545544,0.0001284331,0.0004827098,0.0003496353,0.00009506896],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001905356,0.000195299,0.009258803,0.0001399915,0.0001621957,0.000001983798,0.002252801,0.00000141112,0.9465281,0.00005557371,0.02614001,0.01507335],"study_design_scores_gemma":[0.001222617,0.0009907702,0.01405535,0.0001426186,0.00002719128,0.000008758288,0.001547546,0.00001220221,0.9657337,0.0001366005,0.0158882,0.000234464],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9893615,0.002407417,0.00002585984,0.0005858143,0.0001281228,0.0009622923,0.0001436156,0.00004040741,0.006344987],"genre_scores_gemma":[0.9805087,0.0005484265,0.0001536107,0.00002581587,0.00002973557,0.00008217564,0.00004088357,0.00003448218,0.01857614],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01920563,"threshold_uncertainty_score":0.9998838,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02324680449526744,"score_gpt":0.2911413354337849,"score_spread":0.2678945309385175,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}