{"id":"W2113886620","doi":"10.1530/rep-08-0533","title":"Revealing the bovine embryo transcript profiles during early <i>in vivo</i> embryonic development","year":2009,"lang":"en","type":"article","venue":"Reproduction","topic":"Molecular Biology Techniques and Applications","field":"Biochemistry, Genetics and Molecular Biology","cited_by":31,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; McGill University Health Centre; Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Rheinische Friedrich-Wilhelms-Universität Bonn; Universität für Bodenkultur Wien","keywords":"Biology; Embryogenesis; Gene expression profiling; Embryo; Embryonic stem cell; Gene expression; In vivo; Messenger RNA; Gene; Cell biology; Developmental biology; RNA; Genetics; Computational biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001720857,0.0001792406,0.0002667257,0.0003468804,0.0001570062,0.0005266989,0.0001191519,0.000190145,0.0006782096],"category_scores_gemma":[0.0002304894,0.0001542226,0.0001365328,0.0002550572,0.0001575396,0.0001630027,0.0001187037,0.0003493598,0.0004594782],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000219567,"about_ca_system_score_gemma":0.0001335529,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001259275,"about_ca_topic_score_gemma":0.00208775,"domain_scores_codex":[0.9998604,0.00002338695,0.000008841943,0.00004763136,0.00003361986,0.00002613022],"domain_scores_gemma":[0.9998472,0.00004617321,0.00004325881,0.000008742199,0.00003514844,0.00001940755],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005856737,0.000003400753,0.001346143,0.00002243297,0.000002240591,0.00001897991,0.00003557793,0.00002484081,0.997241,0.00002013019,0.00001968829,0.001206947],"study_design_scores_gemma":[0.00000949552,0.0003687466,0.2399486,0.00002811091,0.00004557954,0.0003958194,0.0002375846,0.0009654957,0.7521042,0.0001021644,0.00577806,0.0000162353],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9738228,0.003344346,0.01777378,0.0000837621,0.00002516338,0.00003161274,0.002487717,0.00009749945,0.002333238],"genre_scores_gemma":[0.976038,0.002556034,0.0129662,0.0001608992,0.00002454006,0.00007263279,0.003959186,0.00007133317,0.004151267],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001259275,"threshold_uncertainty_score":0.002503872,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.00771417145524519,"score_gpt":0.23806289810884,"score_spread":0.2303487266535948,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}