{"id":"W2114120528","doi":"10.1128/jb.01683-07","title":"Proteomic, Microarray, and Signature-Tagged Mutagenesis Analyses of Anaerobic<i>Pseudomonas aeruginosa</i>at pH 6.5, Likely Representing Chronic, Late-Stage Cystic Fibrosis Airway Conditions","year":2008,"lang":"en","type":"article","venue":"Journal of Bacteriology","topic":"Cystic Fibrosis Research Advances","field":"Medicine","cited_by":94,"is_retracted":false,"has_abstract":true,"ca_institutions":"Simon Fraser University; Université Laval","funders":"National Institute of Allergy and Infectious Diseases; National Institute of General Medical Sciences; National Heart, Lung, and Blood Institute","keywords":"Biology; Anaerobic exercise; Pseudomonas aeruginosa; Transcriptome; Microbiology; Cystic fibrosis; Cellular respiration; Gene; Anaerobic bacteria; Bacteria; Biochemistry; Genetics; Gene expression; Mitochondrion; Physiology","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001527959,0.000376816,0.0004164431,0.0004015547,0.0002460627,0.000244807,0.0001465091,0.000314704,0.0003807594],"category_scores_gemma":[0.0002093137,0.0001119074,0.000345292,0.0006065461,0.0001504609,0.0001716408,0.0001712365,0.0003219061,0.0002416999],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001909262,"about_ca_system_score_gemma":0.0002200532,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001376547,"about_ca_topic_score_gemma":0.001455962,"domain_scores_codex":[0.9997829,0.00002747906,0.00001992366,0.00005620464,0.00006500128,0.00004860096],"domain_scores_gemma":[0.9998571,0.00003069664,0.00003840583,0.000008893508,0.00003901477,0.00002591608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00006456717,0.00001684674,0.0004542296,0.00002164316,0.000002827263,0.00002641147,0.00001487717,0.00003351528,0.9989666,0.000008729095,0.00002348171,0.0003663935],"study_design_scores_gemma":[0.00001219047,0.0006507869,0.1851687,0.00001350767,0.00007639381,0.0008637335,0.0003993768,0.003060522,0.8067211,0.0001037513,0.002901318,0.00002861115],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9928551,0.0005116278,0.002327128,0.0001081241,0.00002381298,0.00005051747,0.003292867,0.00004433873,0.000786457],"genre_scores_gemma":[0.9737564,0.001455954,0.01298818,0.0003214209,0.00003275996,0.0002001565,0.008656973,0.00004507765,0.002543144],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001376547,"threshold_uncertainty_score":0.002737105,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02705327274279909,"score_gpt":0.3180621955620667,"score_spread":0.2910089228192677,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}