{"id":"W2114380287","doi":"10.1099/ijs.0.044545-0","title":"Methylophaga nitratireducenticrescens sp. nov. and Methylophaga frappieri sp. nov., isolated from the biofilm of the methanol-fed denitrification system treating the seawater at the Montreal Biodome","year":2012,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institut National de la Recherche Scientifique","funders":"Fonds de recherche du Québec – Nature et technologies; Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Nitrite reductase; Denitrifying bacteria; Operon; Nitrite; Nitrate reductase; 16S ribosomal RNA; Microbiology; Denitrification; Gammaproteobacteria; Strain (injury); Bacteria; Nitrate; Biochemistry; Enzyme; Botany; Gene; Escherichia coli; Genetics; Ecology; Chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009758059,0.0002053885,0.0003631302,0.00004617297,0.0003152803,0.00003169942,0.0005511453,0.0001390536,0.000008949902],"category_scores_gemma":[0.0001597629,0.00008791748,0.0001904848,0.0000878701,0.000423098,0.000007617085,0.000280272,0.0001476914,0.000003373529],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005975504,"about_ca_system_score_gemma":0.00005817303,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002083,"about_ca_topic_score_gemma":0.00004264927,"domain_scores_codex":[0.9979454,0.0006940041,0.0008053982,0.0001844833,0.0001583883,0.0002123375],"domain_scores_gemma":[0.9979606,0.0004065735,0.0008803312,0.0003047726,0.000401216,0.00004645903],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001898289,0.00004652917,0.01726436,0.0001721524,0.001446704,0.000001290407,0.0009979636,0.00002199999,0.9788535,0.0001039286,0.0008179397,0.00008378541],"study_design_scores_gemma":[0.005715758,0.0007928966,0.5090919,0.003408961,0.003563666,0.01064983,0.02159896,0.001019266,0.4369608,0.0005618813,0.005502217,0.001133925],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.958093,0.03846548,0.0003500233,0.001574687,0.0008559225,0.0004454926,0.0001651834,0.000001892325,0.00004835703],"genre_scores_gemma":[0.9983138,0.0006415817,0.0002841943,0.0001661783,0.0004136892,0.0000196144,0.00003243735,0.00001307361,0.0001154372],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5418928,"threshold_uncertainty_score":0.3585171,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01238987756891247,"score_gpt":0.2264084909906839,"score_spread":0.2140186134217714,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}