{"id":"W2114465729","doi":"10.1016/j.jmb.2009.10.070","title":"Structural Characterization of Novel Pseudomonas aeruginosa Type IV Pilins","year":2009,"lang":"en","type":"article","venue":"Journal of Molecular Biology","topic":"Biochemical and Structural Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":40,"is_retracted":false,"has_abstract":false,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Pilus; Pilin; Fimbriae Proteins; Biology; Pseudomonas aeruginosa; Antiparallel (mathematics); Microbiology; Biophysics; Genetics; Bacteria; Gene; Virulence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009608042,0.0001442264,0.0002497609,0.0000689916,0.00002525348,0.000008077603,0.0002081814,0.0002315176,0.00001436967],"category_scores_gemma":[0.0001050371,0.0001138815,0.0001341015,0.0001241722,0.00007319001,0.000007807584,0.00003413325,0.0001249024,6.185022e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009778342,"about_ca_system_score_gemma":0.00006022738,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000001019038,"about_ca_topic_score_gemma":2.353001e-7,"domain_scores_codex":[0.9990761,0.00004887327,0.0004501093,0.0001619017,0.0001023408,0.0001606257],"domain_scores_gemma":[0.9989532,0.000004800353,0.000458434,0.0001593082,0.0003512008,0.00007307563],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0002459371,0.00003523571,0.0007384482,0.000007491091,0.00004146645,0.000003095476,0.00001345649,0.000009319073,0.995765,0.0003679537,0.00001242095,0.00276015],"study_design_scores_gemma":[0.0006706896,0.001103755,0.01956541,0.00001503034,0.00002587361,0.0001616732,0.000004140013,0.00005617215,0.9773067,0.0002788382,0.0006780768,0.0001336574],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.992215,0.0001979488,0.006801042,0.0003437181,0.0002998362,0.00007010493,0.00002183213,0.000003450726,0.00004705614],"genre_scores_gemma":[0.9973928,0.0001063867,0.001482694,0.0004317982,0.000273884,3.162578e-7,0.000280075,0.000008791361,0.00002320431],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01882696,"threshold_uncertainty_score":0.4643952,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01004151855969242,"score_gpt":0.260492664472168,"score_spread":0.2504511459124755,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}