{"id":"W2114657547","doi":"10.1111/j.1365-2958.2009.06686.x","title":"Inducer responses of BenM, a LysR‐type transcriptional regulator from <i>Acinetobacter baylyi</i> ADP1","year":2009,"lang":"en","type":"article","venue":"Molecular Microbiology","topic":"Bacterial Genetics and Biotechnology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":61,"is_retracted":false,"has_abstract":true,"ca_institutions":"Centre for Global Health Research","funders":"Basic Energy Sciences; U.S. Department of Energy; National Science Foundation","keywords":"Effector; Biology; Regulon; Transcription (linguistics); Transcriptional regulation; Mutant; Repressor; Biochemistry; Transcription factor; Inducer; Genetics; Cell biology; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001226202,0.0002818306,0.0003580457,0.0001045221,0.00004467967,0.0000125149,0.0003699416,0.0007850728,0.0001162136],"category_scores_gemma":[0.00005500732,0.0002673727,0.0001781377,0.0001596733,0.0002267041,0.000003163481,0.00009099158,0.0001719456,0.00001855025],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001409659,"about_ca_system_score_gemma":0.0001044544,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002064082,"about_ca_topic_score_gemma":0.00001471423,"domain_scores_codex":[0.9984028,0.0001575587,0.0004133868,0.0005912068,0.00006093163,0.0003740962],"domain_scores_gemma":[0.9990153,0.00001123261,0.0001467073,0.0005920339,0.0001588498,0.00007582663],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0006694268,0.0001156895,0.000254376,0.00000414781,0.0001107844,0.00001053321,0.00001845319,0.000004603844,0.9961826,0.0002739335,0.0008599393,0.001495535],"study_design_scores_gemma":[0.0007390422,0.001018016,0.004731324,0.00001193844,0.00004276233,0.00005785799,0.000008171975,0.000001314471,0.8934417,0.0003195435,0.09936275,0.0002656073],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9955652,0.00212771,0.0003770056,0.0008953023,0.0003455323,0.0001968532,0.0002932054,0.00002338623,0.000175858],"genre_scores_gemma":[0.9942256,0.000148998,0.002361343,0.001786783,0.0001653975,0.000005362001,0.001065917,0.00002697062,0.0002136062],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1027409,"threshold_uncertainty_score":0.9999778,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006931168696742114,"score_gpt":0.2162371471044297,"score_spread":0.2093059784076875,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}