{"id":"W2114662953","doi":"10.1186/gb-2005-6-12-r105","title":"A low-cost open-source SNP genotyping platform for association mapping applications.","year":2005,"lang":"en","type":"article","venue":"Genome Biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Genotyping; SNP genotyping; Single-nucleotide polymorphism; Open source; SNP; Computational biology; Biology; Genetic association; Genome-wide association study; Genetics; Computer science; Genotype; Software; Gene; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000877189,0.0001804511,0.0002859395,0.00006844763,0.0002846511,0.0000337891,0.0004672791,0.0004490491,0.00004290481],"category_scores_gemma":[0.0002605819,0.0001862075,0.0001161693,0.0001126943,0.00004031235,0.000006673981,0.0002724548,0.00009893602,0.00009329639],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001777109,"about_ca_system_score_gemma":0.000100772,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00002265371,"about_ca_topic_score_gemma":0.00007801316,"domain_scores_codex":[0.9983915,0.00007642117,0.0004253947,0.0005183503,0.00004591687,0.0005424126],"domain_scores_gemma":[0.9989776,0.00007568917,0.0003426782,0.0003526582,0.0001645119,0.00008688983],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001488693,0.0002822033,0.04966612,0.00005247988,0.0004485163,1.918408e-7,0.0003725605,0.002909118,0.6593307,0.001988109,0.01007574,0.2747254],"study_design_scores_gemma":[0.0007795468,0.0001015406,0.01135993,0.000002727626,0.00001941274,0.00000410371,0.00008914176,0.0003545647,0.001747252,0.0005659787,0.9847187,0.0002570848],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.3643822,0.001758105,0.6237947,0.00279231,0.0002857135,0.002984561,0.000270906,0.0000622536,0.00366923],"genre_scores_gemma":[0.9578547,0.0004130629,0.02840019,0.003192359,0.001922026,0.001709697,0.002345243,0.00005193505,0.004110775],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.974643,"threshold_uncertainty_score":0.7593321,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02908063315538027,"score_gpt":0.2941577042508027,"score_spread":0.2650770710954224,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}