{"id":"W2114662953","doi":"10.1186/gb-2005-6-12-r105","title":"A low-cost open-source SNP genotyping platform for association mapping applications.","year":2005,"lang":"en","type":"article","venue":"Genome Biology","topic":"Genetic Associations and Epidemiology","field":"Biochemistry, Genetics and Molecular Biology","cited_by":29,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University and Génome Québec Innovation Centre","funders":"National Institute of General Medical Sciences; National Institutes of Health","keywords":"Genotyping; SNP genotyping; Single-nucleotide polymorphism; Open source; SNP; Computational biology; Biology; Genetic association; Genome-wide association study; Genetics; Computer science; Genotype; Software; Gene; Operating system","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.003788707,0.0009247415,0.001444838,0.002208278,0.0009532733,0.00123123,0.002715456,0.002146845,0.0259615],"category_scores_gemma":[0.008946026,0.0009278614,0.001131997,0.001769536,0.0005152752,0.001238616,0.002493495,0.002159104,0.02229272],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000397681,"about_ca_system_score_gemma":0.001422915,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0009364095,"about_ca_topic_score_gemma":0.001672296,"domain_scores_codex":[0.9971638,0.0006311922,0.0001731589,0.0006557673,0.001215529,0.0001603691],"domain_scores_gemma":[0.9962036,0.001212497,0.0004277238,0.001058964,0.000595974,0.0005012754],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001702675,0.0008607928,0.005319719,0.000982224,0.0007330959,0.001310185,0.0002937079,0.005844675,0.2934086,0.01271234,0.1538794,0.5229524],"study_design_scores_gemma":[0.001890415,0.001439186,0.03229936,0.0003189817,0.001025953,0.009325034,0.0001439486,0.09045347,0.2231648,0.04658177,0.5926715,0.0006857157],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"methods","genre_scores_codex":[0.009136956,0.0009221599,0.9393607,0.0006359858,0.0006596353,0.001163826,0.009676645,0.03251611,0.005927974],"genre_scores_gemma":[0.0394774,0.0005558527,0.9154072,0.0007565012,0.0002718183,0.003185385,0.02371424,0.002338554,0.01429298],"genre_candidate":"methods","genre_consensus":"methods","teacher_disagreement_score":0.0259615,"threshold_uncertainty_score":0.08684981,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02908063315538027,"score_gpt":0.2941577042508027,"score_spread":0.2650770710954224,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}