{"id":"W2114671362","doi":"10.1371/journal.ppat.1002567","title":"Comparative Genomics of the Apicomplexan Parasites Toxoplasma gondii and Neospora caninum: Coccidia Differing in Host Range and Transmission Strategy","year":2012,"lang":"en","type":"article","venue":"PLoS Pathogens","topic":"Toxoplasma gondii Research Studies","field":"Immunology and Microbiology","cited_by":235,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children; SickKids Foundation; University of Toronto","funders":"Biotechnology and Biological Sciences Research Council; Canadian Institutes of Health Research; Lundbeckfonden; H. Lundbeck A/S; Deutsche Forschungsgemeinschaft; Wellcome Trust; Wellcome","keywords":"Neospora caninum; Coccidia; Toxoplasma gondii; Biology; Apicomplexa; Neospora; Virology; Host (biology); Transmission (telecommunications); Toxoplasmosis; Cryptosporidium; Parasite hosting; Microbiology; Genetics; Immunology; Protozoal disease; Feces","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001793075,0.0002006595,0.0004414309,0.00008506361,0.0001895219,0.00001082138,0.000134396,0.0001366187,0.00005056599],"category_scores_gemma":[0.00003203373,0.0001406304,0.00004392248,0.0001264198,0.0004166095,0.00008634003,0.0001457745,0.0002985645,0.00000892747],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004056695,"about_ca_system_score_gemma":0.00003628662,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000103895,"about_ca_topic_score_gemma":0.0002775892,"domain_scores_codex":[0.9987667,0.0002553479,0.0002596244,0.0002209159,0.00005005722,0.000447391],"domain_scores_gemma":[0.9993736,0.0002675268,0.00009518264,0.0001755119,0.00003527976,0.00005293317],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0000764178,0.0001056737,0.3093498,0.0000460567,0.00008412504,0.000001935551,0.005958025,0.000002581308,0.6839071,0.0001104224,0.00002727854,0.0003305294],"study_design_scores_gemma":[0.0008064676,0.00009879,0.7803673,0.000047725,0.00003764508,0.00002613077,0.001487736,0.00002497225,0.2164911,0.00002568825,0.0004466789,0.0001397146],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9915085,0.007465951,0.000007026276,0.0000852374,0.00006160101,0.0004378231,0.0001778838,0.00001700867,0.0002389061],"genre_scores_gemma":[0.9991152,0.0005406713,0.0001159481,0.00001652816,0.00001548465,0.00002577729,0.00001392351,0.00001368976,0.000142738],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4710175,"threshold_uncertainty_score":0.573474,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03960859812915803,"score_gpt":0.2658090050175063,"score_spread":0.2262004068883483,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}